eF-site ID 5c07-J
PDB Code 5c07
Chain J

click to enlarge
Title 1E6 TCR in complex with HLA-A02 carrying YQFGPDFPIA
Classification IMMUNE SYSTEM
Compound HLA class I histocompatibility antigen, A-2 alpha chain
Source Homo sapiens (Human) (5C07)
Sequence J:  DAGVIQSPRHEVTEMGQQVTLRCKPISGHDYLFWYRQTMM
RGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQ
PSEPRDSAVYFCASSLWEKLAKNIQYFGAGTRLSVLEDLK
NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS
WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSA
TFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAE
AWGRAD
Description


Functional site

1) chain J
residue 53
type
sequence V
description binding site for residue GOL F 301
source : AC7

2) chain J
residue 97
type
sequence W
description binding site for residue GOL H 101
source : AD5

3) chain J
residue 101
type
sequence A
description binding site for residue GOL H 101
source : AD5

4) chain J
residue 103
type
sequence N
description binding site for residue EDO I 302
source : AD7

5) chain J
residue 30
type
sequence D
description binding site for residue GOL J 301
source : AE1

6) chain J
residue 31
type
sequence Y
description binding site for residue GOL J 301
source : AE1

7) chain J
residue 96
type
sequence L
description binding site for residue GOL J 301
source : AE1

8) chain J
residue 97
type
sequence W
description binding site for residue GOL J 301
source : AE1

9) chain J
residue 2
type
sequence A
description binding site for residue GOL J 302
source : AE2

10) chain J
residue 3
type
sequence G
description binding site for residue GOL J 302
source : AE2

11) chain J
residue 24
type
sequence K
description binding site for residue GOL J 302
source : AE2

12) chain J
residue 25
type
sequence P
description binding site for residue GOL J 302
source : AE2

13) chain J
residue 26
type
sequence I
description binding site for residue GOL J 302
source : AE2

14) chain J
residue 27
type
sequence S
description binding site for residue GOL J 302
source : AE2

15) chain J
residue 36
type
sequence R
description binding site for residue EDO J 303
source : AE3

16) chain J
residue 41
type
sequence R
description binding site for residue EDO J 303
source : AE3

17) chain J
residue 64
type
sequence R
description binding site for residue EDO J 303
source : AE3

18) chain J
residue 85
type
sequence R
description binding site for residue EDO J 303
source : AE3

19) chain J
residue 86
type
sequence D
description binding site for residue EDO J 303
source : AE3

20) chain J
residue 85
type
sequence R
description binding site for residue SO4 J 304
source : AE4

21) chain J
residue 102
type
sequence K
description binding site for residue SO4 J 304
source : AE4

22) chain J
residue 71
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

23) chain J
residue 186
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links