eF-site ID 5bke-ABCDEFG
PDB Code 5bke
Chain A, B, C, D, E, F, G

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Title Crystal structure of AAD-2 in complex with Mn(II) and N-oxalylglycine
Classification OXIDOREDUCTASE
Compound Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
Source (Q89UC4_BRADU)
Sequence A:  MTIAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKY
AVLVFHDQDITDEQQMAFALNFGQREDGLNDVSNLGKDGK
PLAKDSRTHLFNLGNCLWHSDSSFRPIPAKFSLLSARVVN
PTGGNTEFADMRAAYDALDDETKAEIEDLVCEHSLMYSRG
SLGFTEYTDEEKQMFKPVLQRLVRTHPVHRRKSLYLSSHA
GKIASMSVPEGRLLLRDLNEHATQPEFVYVHKWKLHDLVM
WDNRQTMHRVRRYDQSQPRDMRRATVAGTEPTVQQ
B:  IAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKYAV
LVFHDQDITDEQQMAFALNFGQREDRLQSGLNDVSNLGKD
GKPLAKDSRTHLFNLGNCLWHSDSSFRPIPAKFSLLSARV
VNPTGGNTEFADMRAAYDALDDETKAEIEDLVCEHSLMYS
RGSLGFTEYTDEEKQMFKPVLQRLVRTHPVHRRKSLYLSS
HAGKIASMSVPEGRLLLRDLNEHATQPEFVYVHKWKLHDL
VMWDNRQTMHRVRRYDQSQPRDMRRATVAGTEPTVQQ
C:  MTIAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKY
AVLVFHDQDITDEQQMAFALNFGQREDARGGTVTKEKDYR
LQSGLNDVSNLGKDGKPLAKDSRTHLFNLGNCLWHSDSSF
RPIPAKFSLLSARVVNPTGGNTEFADMRAAYDALDDETKA
EIEDLVCEHSLMYSRGSLGFTEYTDEEKQMFKPVLQRLVR
THPVHRRKSLYLSSHAGKIASMSVPEGRLLLRDLNEHATQ
PEFVYVHKWKLHDLVMWDNRQTMHRVRRYDQSQPRDMRRA
TVAGTEPTV
D:  AIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKYAVL
VFHDQDITDEQQMAFALNFGQREDSGLNDVSNLGKDGKPL
AKDSRTHLFNLGNCLWHSDSSFRPIPAKFSLLSARVVNPT
GGNTEFADMRAAYDALDDETKAEIEDLVCEHSLMYSRGSL
GFTEYTDEEKQMFKPVLQRLVRTHPVHRRKSLYLSSHAGK
IASMSVPEGRLLLRDLNEHATQPEFVYVHKWKLHDLVMWD
NRQTMHRVRRYDQSQPRDMRRATVAGTEPTV
E:  MTIAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKY
AVLVFHDQDITDEQQMAFALNFGQREGLNDVSNLLGNCLW
HSDSSFRPIPAKFSLLSARVVNPTGGNTEFADMRAAYDAL
DDETKAEIEDLVCEHSLMYSRGSLGFTEYTDEEKQMFKPV
LQRLVRTHPVHRRKSLYLSSHAGKIASMSVPEGRLLLRDL
NEHATQPEFVYVHKWKLHDLVMWDNRQTMHRVRRYDQSQP
RDMRRATVAGTEPTV
F:  TIAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKYA
VLVFHDQDITDEQQMAFALNFGQRETHLFNLGNCLWHSDS
SFRPIPAKFSLLSARVVNPTGGNTEFADMRAAYDALDDET
KAEIEDLVCEHSLMYSRGSLGFTEYTDEEKQMFKPVLQRL
VRTHPVHRRKSLYLSSHAGKIASMSVPEGRLLLRDLNEHA
TQPEFVYVHKWKLHDLVMWDNRQTMHRVRRYDQSQPRDMR
RATVAGTEPTVQ
G:  IAIRQLQTHFVGQVSGLDLRKPLTPGEAREVESAMDKYAV
LVFHDQDITDEQQMAFALNFGQREDTHLFNLGNCLWHSDS
SFRPIPAKFSLLSARVVNPTGGNTEFADMRAAYDALDDET
KAEIEDLVCEHSLMYSRGSLGFTEYTDEEKQMFKPVLQRL
VRTHPVHRRKSLYLSSHAGKIASMSVPEGRLLLRDLNEHA
TQPEFVYVHKWKLHDLVMWDNRQTMHRVRRYDQSQPRDMR
RATVAGTEPTVQ
Description


Functional site

1) chain A
residue 115
type
sequence H
description binding site for residue MN A 401
source : AC1

2) chain A
residue 117
type
sequence D
description binding site for residue MN A 401
source : AC1

3) chain A
residue 264
type
sequence H
description binding site for residue MN A 401
source : AC1

4) chain A
residue 88
type
sequence V
description binding site for residue OGA A 402
source : AC2

5) chain A
residue 111
type
sequence N
description binding site for residue OGA A 402
source : AC2

6) chain A
residue 115
type
sequence H
description binding site for residue OGA A 402
source : AC2

7) chain A
residue 117
type
sequence D
description binding site for residue OGA A 402
source : AC2

8) chain A
residue 142
type
sequence T
description binding site for residue OGA A 402
source : AC2

9) chain A
residue 257
type
sequence W
description binding site for residue OGA A 402
source : AC2

10) chain A
residue 264
type
sequence H
description binding site for residue OGA A 402
source : AC2

11) chain A
residue 266
type
sequence V
description binding site for residue OGA A 402
source : AC2

12) chain A
residue 275
type
sequence R
description binding site for residue OGA A 402
source : AC2

13) chain A
residue 279
type
sequence R
description binding site for residue OGA A 402
source : AC2

14) chain A
residue 118
type
sequence S
description binding site for residue K A 403
source : AC3

15) chain A
residue 215
type
sequence H
description binding site for residue K A 403
source : AC3

16) chain B
residue 115
type
sequence H
description binding site for residue MN B 401
source : AC4

17) chain B
residue 117
type
sequence D
description binding site for residue MN B 401
source : AC4

18) chain B
residue 264
type
sequence H
description binding site for residue MN B 401
source : AC4

19) chain B
residue 88
type
sequence V
description binding site for residue OGA B 402
source : AC5

20) chain B
residue 111
type
sequence N
description binding site for residue OGA B 402
source : AC5

21) chain B
residue 115
type
sequence H
description binding site for residue OGA B 402
source : AC5

22) chain B
residue 117
type
sequence D
description binding site for residue OGA B 402
source : AC5

23) chain B
residue 130
type
sequence L
description binding site for residue OGA B 402
source : AC5

24) chain B
residue 142
type
sequence T
description binding site for residue OGA B 402
source : AC5

25) chain B
residue 257
type
sequence W
description binding site for residue OGA B 402
source : AC5

26) chain B
residue 264
type
sequence H
description binding site for residue OGA B 402
source : AC5

27) chain B
residue 266
type
sequence V
description binding site for residue OGA B 402
source : AC5

28) chain B
residue 275
type
sequence R
description binding site for residue OGA B 402
source : AC5

29) chain B
residue 279
type
sequence R
description binding site for residue OGA B 402
source : AC5

30) chain B
residue 118
type
sequence S
description binding site for residue K B 403
source : AC6

31) chain B
residue 215
type
sequence H
description binding site for residue K B 403
source : AC6

32) chain C
residue 115
type
sequence H
description binding site for residue MN C 401
source : AC7

33) chain C
residue 117
type
sequence D
description binding site for residue MN C 401
source : AC7

34) chain C
residue 264
type
sequence H
description binding site for residue MN C 401
source : AC7

35) chain C
residue 88
type
sequence V
description binding site for residue OGA C 402
source : AC8

36) chain C
residue 111
type
sequence N
description binding site for residue OGA C 402
source : AC8

37) chain C
residue 115
type
sequence H
description binding site for residue OGA C 402
source : AC8

38) chain C
residue 117
type
sequence D
description binding site for residue OGA C 402
source : AC8

39) chain C
residue 142
type
sequence T
description binding site for residue OGA C 402
source : AC8

40) chain C
residue 257
type
sequence W
description binding site for residue OGA C 402
source : AC8

41) chain C
residue 264
type
sequence H
description binding site for residue OGA C 402
source : AC8

42) chain C
residue 266
type
sequence V
description binding site for residue OGA C 402
source : AC8

43) chain C
residue 275
type
sequence R
description binding site for residue OGA C 402
source : AC8

44) chain C
residue 279
type
sequence R
description binding site for residue OGA C 402
source : AC8

45) chain D
residue 115
type
sequence H
description binding site for residue MN D 401
source : AC9

46) chain D
residue 117
type
sequence D
description binding site for residue MN D 401
source : AC9

47) chain D
residue 264
type
sequence H
description binding site for residue MN D 401
source : AC9

48) chain D
residue 88
type
sequence V
description binding site for residue OGA D 402
source : AD1

49) chain D
residue 111
type
sequence N
description binding site for residue OGA D 402
source : AD1

50) chain D
residue 115
type
sequence H
description binding site for residue OGA D 402
source : AD1

51) chain D
residue 117
type
sequence D
description binding site for residue OGA D 402
source : AD1

52) chain D
residue 130
type
sequence L
description binding site for residue OGA D 402
source : AD1

53) chain D
residue 142
type
sequence T
description binding site for residue OGA D 402
source : AD1

54) chain D
residue 257
type
sequence W
description binding site for residue OGA D 402
source : AD1

55) chain D
residue 264
type
sequence H
description binding site for residue OGA D 402
source : AD1

56) chain D
residue 266
type
sequence V
description binding site for residue OGA D 402
source : AD1

57) chain D
residue 275
type
sequence R
description binding site for residue OGA D 402
source : AD1

58) chain D
residue 279
type
sequence R
description binding site for residue OGA D 402
source : AD1

59) chain E
residue 115
type
sequence H
description binding site for residue MN E 401
source : AD3

60) chain E
residue 117
type
sequence D
description binding site for residue MN E 401
source : AD3

61) chain E
residue 264
type
sequence H
description binding site for residue MN E 401
source : AD3

62) chain E
residue 88
type
sequence V
description binding site for residue OGA E 402
source : AD4

63) chain E
residue 111
type
sequence N
description binding site for residue OGA E 402
source : AD4

64) chain E
residue 115
type
sequence H
description binding site for residue OGA E 402
source : AD4

65) chain E
residue 117
type
sequence D
description binding site for residue OGA E 402
source : AD4

66) chain E
residue 142
type
sequence T
description binding site for residue OGA E 402
source : AD4

67) chain E
residue 264
type
sequence H
description binding site for residue OGA E 402
source : AD4

68) chain E
residue 266
type
sequence V
description binding site for residue OGA E 402
source : AD4

69) chain E
residue 275
type
sequence R
description binding site for residue OGA E 402
source : AD4

70) chain E
residue 279
type
sequence R
description binding site for residue OGA E 402
source : AD4

71) chain F
residue 115
type
sequence H
description binding site for residue MN F 401
source : AD6

72) chain F
residue 117
type
sequence D
description binding site for residue MN F 401
source : AD6

73) chain F
residue 264
type
sequence H
description binding site for residue MN F 401
source : AD6

74) chain F
residue 111
type
sequence N
description binding site for residue OGA F 402
source : AD7

75) chain F
residue 115
type
sequence H
description binding site for residue OGA F 402
source : AD7

76) chain F
residue 117
type
sequence D
description binding site for residue OGA F 402
source : AD7

77) chain F
residue 130
type
sequence L
description binding site for residue OGA F 402
source : AD7

78) chain F
residue 142
type
sequence T
description binding site for residue OGA F 402
source : AD7

79) chain F
residue 264
type
sequence H
description binding site for residue OGA F 402
source : AD7

80) chain F
residue 266
type
sequence V
description binding site for residue OGA F 402
source : AD7

81) chain F
residue 275
type
sequence R
description binding site for residue OGA F 402
source : AD7

82) chain F
residue 279
type
sequence R
description binding site for residue OGA F 402
source : AD7

83) chain F
residue 118
type
sequence S
description binding site for residue K F 403
source : AD8

84) chain F
residue 215
type
sequence H
description binding site for residue K F 403
source : AD8

85) chain G
residue 115
type
sequence H
description binding site for residue MN G 401
source : AD9

86) chain G
residue 117
type
sequence D
description binding site for residue MN G 401
source : AD9

87) chain G
residue 264
type
sequence H
description binding site for residue MN G 401
source : AD9

88) chain G
residue 111
type
sequence N
description binding site for residue OGA G 402
source : AE1

89) chain G
residue 115
type
sequence H
description binding site for residue OGA G 402
source : AE1

90) chain G
residue 117
type
sequence D
description binding site for residue OGA G 402
source : AE1

91) chain G
residue 130
type
sequence L
description binding site for residue OGA G 402
source : AE1

92) chain G
residue 142
type
sequence T
description binding site for residue OGA G 402
source : AE1

93) chain G
residue 257
type
sequence W
description binding site for residue OGA G 402
source : AE1

94) chain G
residue 264
type
sequence H
description binding site for residue OGA G 402
source : AE1

95) chain G
residue 266
type
sequence V
description binding site for residue OGA G 402
source : AE1

96) chain G
residue 275
type
sequence R
description binding site for residue OGA G 402
source : AE1

97) chain G
residue 279
type
sequence R
description binding site for residue OGA G 402
source : AE1


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