eF-site ID 5b41-AC
PDB Code 5b41
Chain A, C

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Title Crystal structure of VDR-LBD complexed with 2-methylidene-19-nor-1a,25-dihydroxyvitamin D3
Classification TRANSCRIPTION
Compound Vitamin D3 receptor
Source (MED1_HUMAN)
Sequence A:  KLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMPLS
MLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKS
SAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGH
TLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPG
VQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQ
KLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGN
C:  KNHPMLMNLLK
Description


Functional site

1) chain A
residue 143
type
sequence Y
description binding site for residue YSV A 501
source : AC1

2) chain A
residue 223
type
sequence L
description binding site for residue YSV A 501
source : AC1

3) chain A
residue 233
type
sequence S
description binding site for residue YSV A 501
source : AC1

4) chain A
residue 270
type
sequence R
description binding site for residue YSV A 501
source : AC1

5) chain A
residue 271
type
sequence S
description binding site for residue YSV A 501
source : AC1

6) chain A
residue 274
type
sequence S
description binding site for residue YSV A 501
source : AC1

7) chain A
residue 282
type
sequence W
description binding site for residue YSV A 501
source : AC1

8) chain A
residue 284
type
sequence C
description binding site for residue YSV A 501
source : AC1

9) chain A
residue 296
type
sequence V
description binding site for residue YSV A 501
source : AC1

10) chain A
residue 301
type
sequence H
description binding site for residue YSV A 501
source : AC1

11) chain A
residue 393
type
sequence H
description binding site for residue YSV A 501
source : AC1

12) chain A
residue 143
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:15065852, ECO:0000269|PubMed:17227670
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 270
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:15065852, ECO:0000269|PubMed:17227670
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 314
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15065852, ECO:0000269|PubMed:17227670
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 348
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15065852, ECO:0000269|PubMed:17227670
source Swiss-Prot : SWS_FT_FI1


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