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eF-site ID
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5anb-K |
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PDB Code
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5anb |
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Chain
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K |
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click to enlarge
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Title
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Mechanism of eIF6 release from the nascent 60S ribosomal subunit |
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Classification
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TRANSLATION |
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Compound
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60S RIBOSOMAL PROTEIN L3 |
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Source
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ORGANISM_COMMON: SLIME MOLD; ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; |
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Sequence
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K: |
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLI
SSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYA
TGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQ
EAYSHLKNILEQINALTGTLFTSKVLEERAERETESQVNP
NSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDG
WGFGIEHFARIYSQKIGIKKEVLMKTLWGDYYINMKAKKI
MKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIV
TSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVC
QKLPSPLDITAERVERLMCTGSQTFDSFPPETQALKAAFM
KCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEEIAQ
RRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEP
RGDEQQVESMTPKPVLQEENNQESFIAFARVFSGVARRGK
KIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCAL
ENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCS
LPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLL
NQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERFAK
IHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
MKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPE
EVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKI
WEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKS
EDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSG
PMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEGQEENET
CSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQ
LIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVY
AVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEI
RKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEK
ADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
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Description
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(1) |
60S RIBOSOMAL PROTEIN L3, 60S RIBOSOMAL PROTEIN L9, 60S ACIDIC RIBOSOMAL PROTEIN P0, 60S RIBOSOMAL PROTEIN L12, 60S RIBOSOMAL PROTEIN L23, 60S RIBOSOMAL PROTEIN L10, 60S RIBOSOMAL PROTEIN L24, UBIQUITIN-60S RIBOSOMAL PROTEIN L40, EUKARYOTIC TRANSLATION INITIATION FACTOR 6, RIBOSOME MATURATION PROTEIN SBDS, ELONGATION FACTOR TU GTP-BINDING DOMAIN-CONTAINING PROTEIN 1
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Functional site
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1)
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chain |
K |
| residue |
26 |
| type |
BINDING |
| sequence |
A
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| description |
BINDING => ECO:0000250
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| source |
Swiss-Prot : SWS_FT_FI1
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2)
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chain |
K |
| residue |
92 |
| type |
BINDING |
| sequence |
D
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| description |
BINDING => ECO:0000250
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| source |
Swiss-Prot : SWS_FT_FI1
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3)
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chain |
K |
| residue |
146 |
| type |
BINDING |
| sequence |
N
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| description |
BINDING => ECO:0000250
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| source |
Swiss-Prot : SWS_FT_FI1
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4)
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chain |
K |
| residue |
528 |
| type |
MOD_RES |
| sequence |
K
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| description |
N6-acetyllysine => ECO:0007744|PubMed:19608861
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| source |
Swiss-Prot : SWS_FT_FI2
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