eF-site ID 5ame-AB
PDB Code 5ame
Chain A, B

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Title Crystal structure of the bromodomain of human surface epitope engineered BRD1A in complex with 3D Consortium fragment 4-acetyl- piperazin-2-one (SGC - Diamond I04-1 fragment screening)
Classification TRANSCRIPTION
Compound BROMODOMAIN-CONTAINING PROTEIN 1
Source (BRD1_HUMAN)
Sequence A:  SMEQVAMELRLTELTRLLRSVLDQLQDKDPARIFAQPVSL
KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDL
IIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSI
GLE
B:  SMEQVAMELRLTELTRLLRSVLDQLQDKDPARIFAQPVSL
KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDL
IIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSI
GLE
Description (1)  BROMODOMAIN-CONTAINING PROTEIN 1


Functional site

1) chain B
residue 110
type
sequence N
description BINDING SITE FOR RESIDUE PW3 B 1145
source : AC1

2) chain B
residue 116
type
sequence F
description BINDING SITE FOR RESIDUE PW3 B 1145
source : AC1

3) chain A
residue 108
type
sequence K
description BINDING SITE FOR RESIDUE NA B 1146
source : AC2

4) chain B
residue 107
type
sequence M
description BINDING SITE FOR RESIDUE NA B 1146
source : AC2

5) chain B
residue 110
type
sequence N
description BINDING SITE FOR RESIDUE NA B 1146
source : AC2

6) chain B
residue 117
type
sequence Y
description BINDING SITE FOR RESIDUE NA B 1146
source : AC2

7) chain B
residue 62
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 62
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 52-109
type prosite
sequence ARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKN
LHEFEEDFDLIIDNCMKY
description BROMODOMAIN_1 Bromodomain signature. AriFaqpvSlkevp..DYLdhIkhpMdfatMrkrleaqg..Yknlhefeedfdl.IidNCmkY
source prosite : PS00633


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