eF-site ID 5akn-KLMO
PDB Code 5akn
Chain K, L, M, O

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Title THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE non-CODING STRAND B AND IN THE PRESENCE OF 2MM MN
Classification HYDROLASE/DNA
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (5AKN)
Sequence K:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPP
L:  GCCTTGCCGGGTAA
M:  GTTCCGGCGCGCGCGCCGGAACTTAC
O:  CCGGCAAGGC
Description


Functional site

1) chain K
residue 19
type
sequence I
description BINDING SITE FOR RESIDUE MN K 1188
source : AC5

2) chain K
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN K 1188
source : AC5

3) chain K
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN K 1188
source : AC5

4) chain M
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN K 1188
source : AC5

5) chain M
residue 1040
type
sequence C
description BINDING SITE FOR RESIDUE MN K 1188
source : AC5

6) chain K
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN K 1189
source : AC6

7) chain K
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN K 1189
source : AC6

8) chain L
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN K 1189
source : AC6

9) chain O
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN K 1189
source : AC6

10) chain K
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

11) chain K
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


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