|
eF-site ID
|
5akf-BCDFGH |
PDB Code
|
5akf |
Chain
|
B, C, D, F, G, H |
|
click to enlarge
|
|
Title
|
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE CODING STRAND A AND IN THE PRESENCE OF 2MM MN |
Classification
|
HYDROLASE |
Compound
|
HOMING ENDONUCLEASE I-DMOI |
Source
|
Desulfurococcus mobilis (5AKF) |
|
Sequence
|
B: |
GCCTTGCCGGGTAA
|
C: |
GTTCCGGCGCG
|
D: |
CGCGCCGGAACTTACCCGGCAAGGC
|
F: |
GCCTTGCCGGGTAA
|
G: |
GTTCCGGCGCG
|
H: |
CGCGCCGGAACTTACCCGGCAAGGC
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
6 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE CL B 1015
|
source |
: AC2
|
|
2)
|
chain |
D |
residue |
22 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE CL B 1015
|
source |
: AC2
|
|
3)
|
chain |
B |
residue |
14 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MN A 1185
|
source |
: AC4
|
|
4)
|
chain |
D |
residue |
16 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN A 1185
|
source |
: AC4
|
|
5)
|
chain |
F |
residue |
14 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MN E 1182
|
source |
: AC5
|
|
6)
|
chain |
H |
residue |
16 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN E 1182
|
source |
: AC5
|
|
|
|