eF-site ID 5akf-AE
PDB Code 5akf
Chain A, E

click to enlarge
Title THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE CODING STRAND A AND IN THE PRESENCE OF 2MM MN
Classification HYDROLASE
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (5AKF)
Sequence A:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLN
E:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSS
Description


Functional site

1) chain A
residue 182
type
sequence L
description BINDING SITE FOR RESIDUE ACT A 1184
source : AC1

2) chain A
residue 183
type
sequence N
description BINDING SITE FOR RESIDUE ACT A 1184
source : AC1

3) chain A
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN A 1185
source : AC4

4) chain A
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN A 1185
source : AC4

5) chain E
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN E 1182
source : AC5

6) chain E
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN E 1182
source : AC5

7) chain A
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

9) chain E
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

10) chain E
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links