|
|
eF-site ID
|
5ak9-JKLN |
|
PDB Code
|
5ak9 |
|
Chain
|
J, K, L, N |
|
click to enlarge
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Title
|
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN |
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Classification
|
HYDROLASE |
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Compound
|
HOMING ENDONUCLEASE I-DMOI |
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Source
|
Desulfurococcus mobilis (5AK9) |
|
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Sequence
|
J: |
ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLP
|
| K: |
GCCTTGCCGGGTAA
|
| L: |
GTTCCGGCGCG
|
| N: |
CGCGCCGGAACTTACCCGGCAAGGC
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
J |
| residue |
21 |
| type |
|
| sequence |
D
|
| description |
BINDING SITE FOR RESIDUE MN J 1187
|
| source |
: AC6
|
|
|
2)
|
chain |
J |
| residue |
116 |
| type |
|
| sequence |
A
|
| description |
BINDING SITE FOR RESIDUE MN J 1187
|
| source |
: AC6
|
|
|
3)
|
chain |
K |
| residue |
14 |
| type |
|
| sequence |
A
|
| description |
BINDING SITE FOR RESIDUE MN J 1187
|
| source |
: AC6
|
|
|
4)
|
chain |
N |
| residue |
16 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE MN J 1187
|
| source |
: AC6
|
|
|
5)
|
chain |
J |
| residue |
20 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE MN J 1188
|
| source |
: AC7
|
|
|
6)
|
chain |
J |
| residue |
117 |
| type |
|
| sequence |
E
|
| description |
BINDING SITE FOR RESIDUE MN J 1188
|
| source |
: AC7
|
|
|
7)
|
chain |
L |
| residue |
15 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE MN J 1188
|
| source |
: AC7
|
|
|
8)
|
chain |
N |
| residue |
15 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE MN J 1188
|
| source |
: AC7
|
|
|
9)
|
chain |
J |
| residue |
21 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
10)
|
chain |
J |
| residue |
117 |
| type |
ACT_SITE |
| sequence |
E
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|