eF-site ID 5ak9-JKLN
PDB Code 5ak9
Chain J, K, L, N

click to enlarge
Title THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN
Classification HYDROLASE
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (5AK9)
Sequence J:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLP
K:  GCCTTGCCGGGTAA
L:  GTTCCGGCGCG
N:  CGCGCCGGAACTTACCCGGCAAGGC
Description


Functional site

1) chain J
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN J 1187
source : AC6

2) chain J
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN J 1187
source : AC6

3) chain K
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN J 1187
source : AC6

4) chain N
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN J 1187
source : AC6

5) chain J
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN J 1188
source : AC7

6) chain J
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN J 1188
source : AC7

7) chain L
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN J 1188
source : AC7

8) chain N
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN J 1188
source : AC7

9) chain J
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

10) chain J
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links