eF-site ID 5af4-ABCDEFGH
PDB Code 5af4
Chain A, B, C, D, E, F, G, H

click to enlarge
Title Structure of Lys33-linked diUb
Classification SIGNALING PROTEIN
Compound UBIQUITIN
Source (Q96C32_HUMAN)
Sequence A:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
B:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
C:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
D:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
E:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
F:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
G:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
H:  MQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
Description


Functional site

1) chain A
residue 8
type
sequence L
description BINDING SITE FOR RESIDUE GOL D 1076
source : AC1

2) chain A
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL D 1076
source : AC1

3) chain D
residue 44
type
sequence I
description BINDING SITE FOR RESIDUE GOL D 1076
source : AC1

4) chain D
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE GOL D 1076
source : AC1

5) chain B
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE GOL B 1076
source : AC2

6) chain B
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 1076
source : AC2

7) chain C
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE GOL B 1076
source : AC2

8) chain C
residue 8
type
sequence L
description BINDING SITE FOR RESIDUE GOL B 1076
source : AC2

9) chain C
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 1076
source : AC2

10) chain D
residue 29
type
sequence K
description BINDING SITE FOR RESIDUE GOL D 1077
source : AC3

11) chain C
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE GOL E 1077
source : AC4

12) chain C
residue 49
type
sequence Q
description BINDING SITE FOR RESIDUE GOL E 1077
source : AC4

13) chain E
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE GOL E 1077
source : AC4

14) chain E
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE GOL E 1077
source : AC4

15) chain F
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE GOL F 1075
source : AC5

16) chain F
residue 66
type
sequence T
description BINDING SITE FOR RESIDUE GOL F 1075
source : AC5

17) chain F
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL F 1075
source : AC5

18) chain G
residue 8
type
sequence L
description BINDING SITE FOR RESIDUE GOL F 1075
source : AC5

19) chain B
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE GOL B 1077
source : AC6

20) chain B
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 1077
source : AC6

21) chain D
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE GOL D 1078
source : AC7

22) chain D
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE GOL D 1078
source : AC7

23) chain A
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1077
source : AC8

24) chain F
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1077
source : AC8

25) chain F
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1077
source : AC8

26) chain D
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE GOL D 1079
source : AC9

27) chain G
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE GOL D 1079
source : AC9

28) chain C
residue 1
type
sequence M
description BINDING SITE FOR RESIDUE SO4 C 1077
source : BC1

29) chain E
residue 11
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1077
source : BC1

30) chain F
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1077
source : BC1

31) chain D
residue 48
type
sequence K
description BINDING SITE FOR RESIDUE SO4 D 1080
source : BC2

32) chain D
residue 54
type
sequence R
description BINDING SITE FOR RESIDUE SO4 D 1080
source : BC2

33) chain D
residue 59
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 D 1080
source : BC2

34) chain G
residue 63
type
sequence K
description BINDING SITE FOR RESIDUE SO4 D 1080
source : BC2

35) chain A
residue 11
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1078
source : BC3

36) chain B
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1078
source : BC3

37) chain B
residue 49
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B 1078
source : BC3

38) chain B
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1078
source : BC3

39) chain A
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1078
source : BC4

40) chain A
residue 74
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1078
source : BC4

41) chain F
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE SO4 A 1078
source : BC4

42) chain F
residue 29
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1078
source : BC4

43) chain C
residue 11
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1078
source : BC5

44) chain D
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1078
source : BC5

45) chain E
residue 1
type
sequence M
description BINDING SITE FOR RESIDUE SO4 C 1078
source : BC5

46) chain C
residue 41
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 C 1079
source : BC6

47) chain C
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1079
source : BC6

48) chain C
residue 49
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 C 1079
source : BC6

49) chain C
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE SO4 C 1079
source : BC6

50) chain A
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299


Display surface

Download
Links