eF-site ID 5ady-6
PDB Code 5ady
Chain 6

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Title Cryo-EM structures of the 50S ribosome subunit bound with HflX
Classification RIBOSOME
Compound 50S RIBOSOMAL PROTEIN L32
Source ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12;
Sequence 6:  MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVE
ALQVITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLF
DHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG
KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTV
SLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID
VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLL
LHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID
MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER
LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSV
SLQVRMPIVDWRRLCKQEPALIDYLI
Description (1)  50S RIBOSOMAL PROTEIN L32, 50S RIBOSOMAL PROTEIN L33, 50S RIBOSOMAL PROTEIN L34, 50S RIBOSOMAL PROTEIN L35, 50S RIBOSOMAL PROTEIN L36, 50S RIBOSOMAL PROTEIN L1, GTPASE HFLX, 50S RIBOSOMAL PROTEIN L10, 50S RIBOSOMAL PROTEIN L2, 50S RIBOSOMAL PROTEIN L4, 50S RIBOSOMAL PROTEIN L5, 50S RIBOSOMAL PROTEIN L6, 50S RIBOSOMAL PROTEIN L9, 50S RIBOSOMAL PROTEIN L11, 50S RIBOSOMAL PROTEIN L13, 50S RIBOSOMAL PROTEIN L14, 50S RIBOSOMAL PROTEIN L15, 50S RIBOSOMAL PROTEIN L16, 50S RIBOSOMAL PROTEIN L17, 50S RIBOSOMAL PROTEIN L18, 50S RIBOSOMAL PROTEIN L19, 50S RIBOSOMAL PROTEIN L20, 50S RIBOSOMAL PROTEIN L21, 50S RIBOSOMAL PROTEIN L22, 50S RIBOSOMAL PROTEIN L23, 50S RIBOSOMAL PROTEIN L24, 50S RIBOSOMAL PROTEIN L25, 50S RIBOSOMAL PROTEIN L27, 50S RIBOSOMAL PROTEIN L28, 50S RIBOSOMAL PROTEIN L29, 50S RIBOSOMAL PROTEIN L30


Functional site

1) chain 6
residue 205
type
sequence Y
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

2) chain 6
residue 207
type
sequence N
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

3) chain 6
residue 208
type
sequence A
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

4) chain 6
residue 209
type
sequence G
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

5) chain 6
residue 210
type
sequence K
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

6) chain 6
residue 211
type
sequence S
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

7) chain 6
residue 212
type
sequence T
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

8) chain 6
residue 224
type
sequence A
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

9) chain 6
residue 225
type
sequence A
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

10) chain 6
residue 230
type
sequence A
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

11) chain 6
residue 231
type
sequence T
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

12) chain 6
residue 317
type
sequence N
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

13) chain 6
residue 318
type
sequence K
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

14) chain 6
residue 320
type
sequence D
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

15) chain 6
residue 343
type
sequence S
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

16) chain 6
residue 344
type
sequence A
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

17) chain 6
residue 345
type
sequence Q
description BINDING SITE FOR RESIDUE GNP 6 527
source : AC1

18) chain 6
residue 210
type
sequence K
description BINDING SITE FOR RESIDUE MG 6 528
source : AC2

19) chain 6
residue 211
type
sequence S
description BINDING SITE FOR RESIDUE MG 6 528
source : AC2

20) chain 6
residue 231
type
sequence T
description BINDING SITE FOR RESIDUE MG 6 528
source : AC2

21) chain 6
residue 251
type
sequence D
description BINDING SITE FOR RESIDUE MG 6 528
source : AC2

22) chain 6
residue 231
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:34403461, ECO:0000269|PubMed:34504068, ECO:0000312|PDB:7O19, ECO:0000312|PDB:7O1A, ECO:0000312|PDB:7O1C, ECO:0000312|PDB:7OIZ, ECO:0000312|PDB:7OJ0
source Swiss-Prot : SWS_FT_FI1

23) chain 6
residue 251
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:34403461, ECO:0000269|PubMed:34504068, ECO:0000312|PDB:7O19, ECO:0000312|PDB:7O1A, ECO:0000312|PDB:7O1C, ECO:0000312|PDB:7OIZ, ECO:0000312|PDB:7OJ0
source Swiss-Prot : SWS_FT_FI1

24) chain 6
residue 317
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:34403461, ECO:0000269|PubMed:34504068, ECO:0000312|PDB:7O19, ECO:0000312|PDB:7O1A, ECO:0000312|PDB:7O1C, ECO:0000312|PDB:7OIZ, ECO:0000312|PDB:7OJ0
source Swiss-Prot : SWS_FT_FI1

25) chain 6
residue 343
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:34403461, ECO:0000269|PubMed:34504068, ECO:0000312|PDB:7O19, ECO:0000312|PDB:7O1A, ECO:0000312|PDB:7O1C, ECO:0000312|PDB:7OIZ, ECO:0000312|PDB:7OJ0
source Swiss-Prot : SWS_FT_FI1


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