eF-site ID 5a00-A
PDB Code 5a00
Chain A

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Title Structure of human PARP1 catalytic domain bound to an isoindolinone inhibitor
Classification TRANSFERASE
Compound POLY [ADP-RIBOSE] POLYMERASE 1
Source (PARP1_HUMAN)
Sequence A:  KSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKL
SKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIP
HDPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSKDPI
DVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYD
LEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFA
GILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHT
SQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKG
LGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYI
VYDIAQVNLKYLLKLKFNFK
Description (1)  POLY [ADP-RIBOSE] POLYMERASE 1 (E.C.2.4.2.30)


Functional site

1) chain A
residue 759
type
sequence Q
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

2) chain A
residue 762
type
sequence V
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

3) chain A
residue 862
type
sequence H
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

4) chain A
residue 863
type
sequence G
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

5) chain A
residue 887
type
sequence T
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

6) chain A
residue 888
type
sequence G
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

7) chain A
residue 889
type
sequence Y
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

8) chain A
residue 896
type
sequence Y
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

9) chain A
residue 897
type
sequence F
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

10) chain A
residue 898
type
sequence A
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

11) chain A
residue 903
type
sequence K
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

12) chain A
residue 904
type
sequence S
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

13) chain A
residue 907
type
sequence Y
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

14) chain A
residue 988
type
sequence E
description BINDING SITE FOR RESIDUE D7N A 2012
source : AC1

15) chain A
residue 903
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 2013
source : AC2

16) chain A
residue 985
type
sequence L
description BINDING SITE FOR RESIDUE SO4 A 2013
source : AC2

17) chain A
residue 986
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 2013
source : AC2

18) chain A
residue 858
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 2014
source : AC3

19) chain A
residue 928
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 2014
source : AC3

20) chain A
residue 929
type
sequence M
description BINDING SITE FOR RESIDUE SO4 A 2014
source : AC3

21) chain A
residue 945
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 2014
source : AC3

22) chain A
residue 949
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 2014
source : AC3

23) chain A
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

25) chain A
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

26) chain A
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

27) chain A
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

28) chain A
residue 782
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3


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