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|
eF-site ID
|
4zux-l |
|
PDB Code
|
4zux |
|
Chain
|
l |
|
click to enlarge
|
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Title
|
SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome |
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Classification
|
Hydrolase/DNA |
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Compound
|
Histone H3.2 |
|
Source
|
Xenopus laevis (African clawed frog) (SGF73_YEAST) |
|
|
Sequence
|
l: |
EETITIDSISNGILNNLLTTLIQDIVARETTQQQLLKTRY
PDLRSYYFDPNGSLDINGLQKQQESSQYIHCENCGRDVSA
NRLAAHLQRCLSR
|
|
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Description
|
(1) |
Histone H3.2, Histone H4, Histone H2A type 1, Histone H2B 1.1, Ubiquitin carboxyl-terminal hydrolase 8, Transcription and mRNA export factor SUS1, SAGA-associated factor 11, Polyubiquitin-B, SAGA-associated factor 73/DNA Complex
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Functional site
|
|
|
1)
|
chain |
l |
| residue |
73 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN l 101
|
| source |
: AF4
|
|
|
2)
|
chain |
l |
| residue |
75 |
| type |
|
| sequence |
N
|
| description |
binding site for residue ZN l 101
|
| source |
: AF4
|
|
|
3)
|
chain |
l |
| residue |
76 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN l 101
|
| source |
: AF4
|
|
|
4)
|
chain |
l |
| residue |
88 |
| type |
|
| sequence |
H
|
| description |
binding site for residue ZN l 101
|
| source |
: AF4
|
|
|
5)
|
chain |
l |
| residue |
92 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN l 101
|
| source |
: AF4
|
|
|
|