eF-site ID 4zux-U
PDB Code 4zux
Chain U

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Title SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome
Classification Hydrolase/DNA
Compound Histone H3.2
Source Xenopus laevis (African clawed frog) (SGF73_YEAST)
Sequence U:  AMSICPHIQQVFQNEKSKDGVLKTCNAARYILNHSVPKEK
FLNTMKCGTCHEINSGATFMCLQCGFCGCWNHSHFLSHSK
QIGHIFGINSNNGLLFCFKCEDYIGNIDLINDAILAKYWD
DVCTKTMVPSMERRDGLSGLINMGSTAFMSSILQCLIHNP
YFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALN
TSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIIN
QIHQSYVLDLPNNNKQCECIVHTVFEGSLESSIVCPGCQN
NSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFNY
HCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNR
KLDDFIEFPTYLNMKNYCSTKVPDIIYELIGIVSHKGTVN
EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLF
YTIRQVN
Description (1)  Histone H3.2, Histone H4, Histone H2A type 1, Histone H2B 1.1, Ubiquitin carboxyl-terminal hydrolase 8, Transcription and mRNA export factor SUS1, SAGA-associated factor 11, Polyubiquitin-B, SAGA-associated factor 73/DNA Complex


Functional site

1) chain U
residue 46
type
sequence C
description binding site for residue ZN U 501
source : AC1

2) chain U
residue 49
type
sequence C
description binding site for residue ZN U 501
source : AC1

3) chain U
residue 68
type
sequence C
description binding site for residue ZN U 501
source : AC1

4) chain U
residue 73
type
sequence H
description binding site for residue ZN U 501
source : AC1

5) chain U
residue 60
type
sequence C
description binding site for residue ZN U 502
source : AC2

6) chain U
residue 63
type
sequence C
description binding site for residue ZN U 502
source : AC2

7) chain U
residue 77
type
sequence H
description binding site for residue ZN U 502
source : AC2

8) chain U
residue 83
type
sequence H
description binding site for residue ZN U 502
source : AC2

9) chain U
residue 4
type
sequence C
description binding site for residue ZN U 503
source : AC3

10) chain U
residue 6
type
sequence H
description binding site for residue ZN U 503
source : AC3

11) chain U
residue 96
type
sequence C
description binding site for residue ZN U 503
source : AC3

12) chain U
residue 99
type
sequence C
description binding site for residue ZN U 503
source : AC3

13) chain U
residue 170
type
sequence H
description binding site for residue ZN U 504
source : AC4

14) chain U
residue 174
type
sequence C
description binding site for residue ZN U 504
source : AC4

15) chain U
residue 182
type
sequence C
description binding site for residue ZN U 504
source : AC4

16) chain U
residue 185
type
sequence C
description binding site for residue ZN U 504
source : AC4

17) chain U
residue 250
type
sequence H
description binding site for residue ZN U 505
source : AC5

18) chain U
residue 271
type
sequence C
description binding site for residue ZN U 505
source : AC5

19) chain U
residue 273
type
sequence C
description binding site for residue ZN U 505
source : AC5

20) chain U
residue 276
type
sequence H
description binding site for residue ZN U 505
source : AC5

21) chain U
residue 289
type
sequence C
description binding site for residue ZN U 506
source : AC6

22) chain U
residue 292
type
sequence C
description binding site for residue ZN U 506
source : AC6

23) chain U
residue 336
type
sequence C
description binding site for residue ZN U 506
source : AC6

24) chain U
residue 339
type
sequence C
description binding site for residue ZN U 506
source : AC6

25) chain U
residue 68
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

26) chain U
residue 73
type MOD_RES
sequence H
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

27) chain U
residue 77
type MOD_RES
sequence H
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

28) chain U
residue 83
type MOD_RES
sequence H
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4


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