|
eF-site ID
|
4zux-C |
PDB Code
|
4zux |
Chain
|
C |
|
click to enlarge
|
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Title
|
SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome |
Classification
|
Hydrolase/DNA |
Compound
|
Histone H3.2 |
Source
|
Xenopus laevis (African clawed frog) (SGF73_YEAST) |
|
Sequence
|
C: |
TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVL
EYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNK
LLGRVTIAQGGVLPNIQSVLLPK
|
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Description
|
(1) |
Histone H3.2, Histone H4, Histone H2A type 1, Histone H2B 1.1, Ubiquitin carboxyl-terminal hydrolase 8, Transcription and mRNA export factor SUS1, SAGA-associated factor 11, Polyubiquitin-B, SAGA-associated factor 73/DNA Complex
|
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Functional site
|
|
1)
|
chain |
C |
residue |
21-27 |
type |
prosite |
sequence |
AGLQFPV
|
description |
HISTONE_H2A Histone H2A signature. AGLqFPV
|
source |
prosite : PS00046
|
|
2)
|
chain |
C |
residue |
118 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
|
source |
Swiss-Prot : SWS_FT_FI7
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