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eF-site ID
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4zux-C |
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PDB Code
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4zux |
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Chain
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C |
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click to enlarge
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Title
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SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome |
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Classification
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Hydrolase/DNA |
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Compound
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Histone H3.2 |
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Source
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Xenopus laevis (African clawed frog) (SGF73_YEAST) |
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Sequence
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C: |
TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVL
EYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNK
LLGRVTIAQGGVLPNIQSVLLPK
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Description
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(1) |
Histone H3.2, Histone H4, Histone H2A type 1, Histone H2B 1.1, Ubiquitin carboxyl-terminal hydrolase 8, Transcription and mRNA export factor SUS1, SAGA-associated factor 11, Polyubiquitin-B, SAGA-associated factor 73/DNA Complex
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Functional site
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1)
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chain |
C |
| residue |
21-27 |
| type |
prosite |
| sequence |
AGLQFPV
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| description |
HISTONE_H2A Histone H2A signature. AGLqFPV
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| source |
prosite : PS00046
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2)
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chain |
C |
| residue |
118 |
| type |
CROSSLNK |
| sequence |
K
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| description |
Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
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| source |
Swiss-Prot : SWS_FT_FI7
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