eF-site ID 4zup-A
PDB Code 4zup
Chain A

click to enlarge
Title Crystal structure of acetylpolyamine amidohydrolase from Mycoplana ramosa in complex with a hydroxamate inhibitor
Classification Hydrolase/Hydrolase inhibitor
Compound Acetylpolyamine aminohydrolase
Source (APHA_MYCRA)
Sequence A:  MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAV
KEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKA
AGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAI
SPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHA
GIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGN
GTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAG
AGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVS
LGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVME
GGYGVPEIGLNVANVLKGVAG
Description


Functional site

1) chain A
residue 195
type
sequence D
description binding site for residue ZN A 401
source : AC1

2) chain A
residue 197
type
sequence H
description binding site for residue ZN A 401
source : AC1

3) chain A
residue 284
type
sequence D
description binding site for residue ZN A 401
source : AC1

4) chain A
residue 146
type
sequence H
description binding site for residue ZN A 402
source : AC2

5) chain A
residue 193
type
sequence D
description binding site for residue K A 403
source : AC3

6) chain A
residue 195
type
sequence D
description binding site for residue K A 403
source : AC3

7) chain A
residue 197
type
sequence H
description binding site for residue K A 403
source : AC3

8) chain A
residue 216
type
sequence S
description binding site for residue K A 403
source : AC3

9) chain A
residue 217
type
sequence L
description binding site for residue K A 403
source : AC3

10) chain A
residue 206
type
sequence F
description binding site for residue K A 404
source : AC4

11) chain A
residue 209
type
sequence R
description binding site for residue K A 404
source : AC4

12) chain A
residue 212
type
sequence V
description binding site for residue K A 404
source : AC4

13) chain A
residue 243
type
sequence T
description binding site for residue K A 404
source : AC4

14) chain A
residue 117
type
sequence E
description binding site for residue 5XA A 405
source : AC5

15) chain A
residue 158
type
sequence H
description binding site for residue 5XA A 405
source : AC5

16) chain A
residue 159
type
sequence H
description binding site for residue 5XA A 405
source : AC5

17) chain A
residue 168
type
sequence Y
description binding site for residue 5XA A 405
source : AC5

18) chain A
residue 195
type
sequence D
description binding site for residue 5XA A 405
source : AC5

19) chain A
residue 197
type
sequence H
description binding site for residue 5XA A 405
source : AC5

20) chain A
residue 225
type
sequence F
description binding site for residue 5XA A 405
source : AC5

21) chain A
residue 284
type
sequence D
description binding site for residue 5XA A 405
source : AC5

22) chain A
residue 323
type
sequence Y
description binding site for residue 5XA A 405
source : AC5

23) chain A
residue 15
type
sequence K
description binding site for residue GOL A 406
source : AC6

24) chain A
residue 75
type
sequence W
description binding site for residue GOL A 406
source : AC6

25) chain A
residue 84
type
sequence K
description binding site for residue GOL A 406
source : AC6

26) chain A
residue 85
type
sequence G
description binding site for residue GOL A 406
source : AC6

27) chain A
residue 1
type
sequence M
description binding site for residue NO3 A 407
source : AC7

28) chain A
residue 45
type
sequence F
description binding site for residue NO3 A 407
source : AC7

29) chain A
residue 340
type
sequence A
description binding site for residue NO3 A 407
source : AC7

30) chain A
residue 1
type
sequence M
description binding site for residue NO3 A 408
source : AC8

31) chain A
residue 146
type
sequence H
description binding site for residue NO3 A 408
source : AC8

32) chain A
residue 147
type
sequence K
description binding site for residue NO3 A 408
source : AC8

33) chain A
residue 148
type
sequence A
description binding site for residue NO3 A 408
source : AC8

34) chain A
residue 231
type
sequence Y
description binding site for residue GOL A 409
source : AC9

35) chain A
residue 232
type
sequence A
description binding site for residue GOL A 409
source : AC9

36) chain A
residue 233
type
sequence E
description binding site for residue GOL A 409
source : AC9

37) chain A
residue 19
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21268586, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI2

38) chain A
residue 117
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:21268586, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI2

39) chain A
residue 323
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21268586, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 159
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000305|PubMed:21268586, ECO:0000305|PubMed:26200446
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 106
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:21268586, ECO:0007744|PDB:3Q9C
source Swiss-Prot : SWS_FT_FI3

42) chain A
residue 195
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:21268586, ECO:0000269|PubMed:26200446, ECO:0007744|PDB:3Q9B, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI4

43) chain A
residue 197
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:21268586, ECO:0000269|PubMed:26200446, ECO:0007744|PDB:3Q9B, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI4

44) chain A
residue 284
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:21268586, ECO:0000269|PubMed:26200446, ECO:0007744|PDB:3Q9B, ECO:0007744|PDB:3Q9E
source Swiss-Prot : SWS_FT_FI4

45) chain A
residue 323
type SITE
sequence Y
description Polarizes the scissile carbonyl of the substrate => ECO:0000305|PubMed:21268586
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links