eF-site ID 4z9s-D
PDB Code 4z9s
Chain D

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Title Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin
Classification CELL CYCLE
Compound Ubiquitin-40S ribosomal protein S27a
Source Bos taurus (Bovine) (RS27A_BOVIN)
Sequence D:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Description


Functional site

1) chain D
residue 33
type
sequence K
description binding site for residue SCN A 103
source : AC3

2) chain D
residue 54
type
sequence R
description binding site for residue SCN A 106
source : AC6

3) chain D
residue 37
type
sequence P
description binding site for residue MLA C 102
source : AD2

4) chain D
residue 39
type
sequence D
description binding site for residue MLA C 102
source : AD2

5) chain D
residue 40
type
sequence Q
description binding site for residue MLA C 102
source : AD2

6) chain D
residue 74
type
sequence R
description binding site for residue MLA C 102
source : AD2

7) chain D
residue 53
type
sequence G
description binding site for residue SCN C 103
source : AD3

8) chain D
residue 42
type
sequence R
description binding site for residue MLA D 101
source : AD5

9) chain D
residue 50
type
sequence L
description binding site for residue MLA D 101
source : AD5

10) chain D
residue 51
type
sequence E
description binding site for residue MLA D 101
source : AD5

11) chain D
residue 52
type
sequence D
description binding site for residue MLA D 101
source : AD5

12) chain D
residue 72
type
sequence R
description binding site for residue MLA D 101
source : AD5

13) chain D
residue 37
type
sequence P
description binding site for residue SCN D 102
source : AD6

14) chain D
residue 40
type
sequence Q
description binding site for residue SCN D 102
source : AD6

15) chain D
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

16) chain D
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

17) chain D
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

18) chain D
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

19) chain D
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

20) chain D
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

21) chain D
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

22) chain D
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

23) chain D
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

24) chain D
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

25) chain D
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI3


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