eF-site ID 4z9s-B
PDB Code 4z9s
Chain B

click to enlarge
Title Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin
Classification CELL CYCLE
Compound Ubiquitin-40S ribosomal protein S27a
Source Bos taurus (Bovine) (RS27A_BOVIN)
Sequence B:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Description


Functional site

1) chain B
residue 37
type
sequence P
description binding site for residue MLA A 101
source : AC1

2) chain B
residue 39
type
sequence D
description binding site for residue MLA A 101
source : AC1

3) chain B
residue 40
type
sequence Q
description binding site for residue MLA A 101
source : AC1

4) chain B
residue 74
type
sequence R
description binding site for residue MLA A 101
source : AC1

5) chain B
residue 24
type
sequence E
description binding site for residue MLA A 102
source : AC2

6) chain B
residue 53
type
sequence G
description binding site for residue MLA A 102
source : AC2

7) chain B
residue 4
type
sequence F
description binding site for residue SCN A 104
source : AC4

8) chain B
residue 12
type
sequence T
description binding site for residue SCN A 104
source : AC4

9) chain B
residue 42
type
sequence R
description binding site for residue MLA B 101
source : AC7

10) chain B
residue 50
type
sequence L
description binding site for residue MLA B 101
source : AC7

11) chain B
residue 51
type
sequence E
description binding site for residue MLA B 101
source : AC7

12) chain B
residue 52
type
sequence D
description binding site for residue MLA B 101
source : AC7

13) chain B
residue 72
type
sequence R
description binding site for residue MLA B 101
source : AC7

14) chain B
residue 71
type
sequence L
description binding site for residue SCN B 102
source : AC8

15) chain B
residue 33
type
sequence K
description binding site for residue SCN B 103
source : AC9

16) chain B
residue 14
type
sequence T
description binding site for residue MLA C 101
source : AD1

17) chain B
residue 15
type
sequence L
description binding site for residue MLA C 101
source : AD1

18) chain B
residue 16
type
sequence E
description binding site for residue MLA C 101
source : AD1

19) chain B
residue 33
type
sequence K
description binding site for residue MLA C 101
source : AD1

20) chain B
residue 35
type
sequence G
description binding site for residue MLA C 102
source : AD2

21) chain B
residue 35
type
sequence G
description binding site for residue SCN D 102
source : AD6

22) chain B
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

24) chain B
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI3

26) chain B
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

27) chain B
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

28) chain B
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

29) chain B
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

30) chain B
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

31) chain B
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

32) chain B
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links