eF-site ID 4z9s-A
PDB Code 4z9s
Chain A

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Title Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin
Classification CELL CYCLE
Compound Ubiquitin-40S ribosomal protein S27a
Source Bos taurus (Bovine) (RS27A_BOVIN)
Sequence A:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Description


Functional site

1) chain A
residue 37
type
sequence P
description binding site for residue MLA A 101
source : AC1

2) chain A
residue 39
type
sequence D
description binding site for residue MLA A 101
source : AC1

3) chain A
residue 40
type
sequence Q
description binding site for residue MLA A 101
source : AC1

4) chain A
residue 74
type
sequence R
description binding site for residue MLA A 101
source : AC1

5) chain A
residue 15
type
sequence L
description binding site for residue MLA A 102
source : AC2

6) chain A
residue 16
type
sequence E
description binding site for residue MLA A 102
source : AC2

7) chain A
residue 32
type
sequence D
description binding site for residue MLA A 102
source : AC2

8) chain A
residue 33
type
sequence K
description binding site for residue MLA A 102
source : AC2

9) chain A
residue 49
type
sequence Q
description binding site for residue SCN A 103
source : AC3

10) chain A
residue 52
type
sequence D
description binding site for residue SCN A 103
source : AC3

11) chain A
residue 6
type
sequence K
description binding site for residue SCN A 104
source : AC4

12) chain A
residue 64
type
sequence E
description binding site for residue SCN A 104
source : AC4

13) chain A
residue 7
type
sequence T
description binding site for residue SCN A 105
source : AC5

14) chain A
residue 9
type
sequence T
description binding site for residue SCN A 105
source : AC5

15) chain A
residue 48
type
sequence K
description binding site for residue SCN A 106
source : AC6

16) chain A
residue 58
type
sequence D
description binding site for residue SCN A 106
source : AC6

17) chain A
residue 59
type
sequence Y
description binding site for residue SCN A 106
source : AC6

18) chain A
residue 33
type
sequence K
description binding site for residue MLA B 101
source : AC7

19) chain A
residue 48
type
sequence K
description binding site for residue SCN C 104
source : AD4

20) chain A
residue 49
type
sequence Q
description binding site for residue SCN C 104
source : AD4

21) chain A
residue 51
type
sequence E
description binding site for residue SCN C 104
source : AD4

22) chain A
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

23) chain A
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

25) chain A
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

27) chain A
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

28) chain A
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

29) chain A
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

30) chain A
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

31) chain A
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

32) chain A
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

33) chain A
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5


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