eF-site ID 4z2m-BGHIJ
PDB Code 4z2m
Chain B, G, H, I, J

click to enlarge
Title Crystal structure of human SPT16 Mid-AID/H3-H4 tetramer FACT Histone complex
Classification Transcription/DNA binding protein
Compound FACT complex subunit SPT16
Source (H4_HUMAN)
Sequence B:  VKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVN
GFRFTSVRGDKVDILYNNIKHALFQPCDGEMIIVLHFHLK
NAIMFGKKRHTDVQFYTEVGEITTDDDLYAEQMEREMRHK
LKTAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTC
LLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNF
DMVIVYKDYSKKVTMINAIPVASLDPIKEWLNSCDLKYTE
GVQSLNWTKIMKTIVDDPEGFFEQGGWSFLE
G:  TELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACE
AYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
H:  RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFL
ENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ
I:  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
J:  DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE
NVIRDAVTYTEHAKRKTVTAMDVVYALKRQ
Description


Functional site

1) chain H
residue 59
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI10

2) chain J
residue 59
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI10

3) chain B
residue 904
type MOD_RES
sequence K
description Symmetric dimethylarginine; by PRMT5 and PRMT7; alternate => ECO:0000250|UniProtKB:P62806
source Swiss-Prot : SWS_FT_FI3

4) chain H
residue 44
type MOD_RES
sequence K
description N6-propionyllysine; alternate => ECO:0000269|PubMed:17267393
source Swiss-Prot : SWS_FT_FI5

5) chain J
residue 44
type MOD_RES
sequence K
description N6-propionyllysine; alternate => ECO:0000269|PubMed:17267393
source Swiss-Prot : SWS_FT_FI5

6) chain H
residue 31
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

7) chain H
residue 77
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

8) chain H
residue 91
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

9) chain J
residue 31
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

10) chain J
residue 77
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

11) chain J
residue 91
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI6

12) chain H
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62806
source Swiss-Prot : SWS_FT_FI11

13) chain J
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62806
source Swiss-Prot : SWS_FT_FI11

14) chain H
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P62806
source Swiss-Prot : SWS_FT_FI12

15) chain J
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P62806
source Swiss-Prot : SWS_FT_FI12

16) chain H
residue 88
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI13

17) chain J
residue 88
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI13

18) chain H
residue 47
type MOD_RES
sequence S
description Phosphoserine; by PAK2 => ECO:0000269|PubMed:21724829, ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI8

19) chain J
residue 47
type MOD_RES
sequence S
description Phosphoserine; by PAK2 => ECO:0000269|PubMed:21724829, ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI8

20) chain H
residue 51
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:15592455, ECO:0007744|PubMed:20068231
source Swiss-Prot : SWS_FT_FI9

21) chain J
residue 51
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:15592455, ECO:0007744|PubMed:20068231
source Swiss-Prot : SWS_FT_FI9

22) chain H
residue 91
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:19818714
source Swiss-Prot : SWS_FT_FI15

23) chain J
residue 91
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:19818714
source Swiss-Prot : SWS_FT_FI15

24) chain H
residue 59
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

25) chain H
residue 79
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

26) chain J
residue 59
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

27) chain J
residue 79
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

28) chain H
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000269|PubMed:30886146
source Swiss-Prot : SWS_FT_FI17

29) chain J
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000269|PubMed:30886146
source Swiss-Prot : SWS_FT_FI17

30) chain G
residue 66-74
type prosite
sequence PFQRLVREI
description HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
source prosite : PS00959


Display surface

Download
Links