eF-site ID 4ykm-AB
PDB Code 4ykm
Chain A, B

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Title Crystal structure of the R111K:Y134F:T54V:R132Q:P39Q:R59Y:A32W:F3Q mutant of human Cellular Retinoic Acid Binding Protein II with Retinal at 1.58 angstrom resolution
Classification TRANSPORT PROTEIN
Compound Cellular retinoic acid-binding protein 2
Source Homo sapiens (Human) (RABP2_HUMAN)
Sequence A:  PNQSGNWKIIRSENFEELLKVLGVNVMLRKIWVAAASKQA
VEIKQEGDTFYIKVSTTVYTTEINFKVGEEFEEQTVDGRP
CKSLVKWESENKMVCEQKLLKGEGPKTSWTKELTNDGELI
LTMTADDVVCTQVFVRE
B:  PNQSGNWKIIRSENFEELLKVLGVNVMLRKIWVAAASKQA
VEIKQEGDTFYIKVSTTVYTTEINFKVGEEFEEQTVDGRP
CKSLVKWESENKMVCEQKLLKGEGPKTSWTKELTNDGELI
LTMTADDVVCTQVFVRE
Description


Functional site

1) chain A
residue 32
type
sequence W
description binding site for residue RET A 201
source : AC1

2) chain A
residue 39
type
sequence Q
description binding site for residue RET A 201
source : AC1

3) chain A
residue 52
type
sequence I
description binding site for residue RET A 201
source : AC1

4) chain A
residue 54
type
sequence V
description binding site for residue RET A 201
source : AC1

5) chain A
residue 56
type
sequence T
description binding site for residue RET A 201
source : AC1

6) chain A
residue 59
type
sequence Y
description binding site for residue RET A 201
source : AC1

7) chain A
residue 63
type
sequence I
description binding site for residue RET A 201
source : AC1

8) chain A
residue 76
type
sequence V
description binding site for residue RET A 201
source : AC1

9) chain A
residue 109
type
sequence W
description binding site for residue RET A 201
source : AC1

10) chain A
residue 111
type
sequence K
description binding site for residue RET A 201
source : AC1

11) chain A
residue 121
type
sequence L
description binding site for residue RET A 201
source : AC1

12) chain B
residue 3
type
sequence Q
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

13) chain B
residue 32
type
sequence W
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

14) chain B
residue 52
type
sequence I
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

15) chain B
residue 54
type
sequence V
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

16) chain B
residue 56
type
sequence T
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

17) chain B
residue 59
type
sequence Y
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

18) chain B
residue 76
type
sequence V
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

19) chain B
residue 92
type
sequence K
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

20) chain B
residue 93
type
sequence M
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

21) chain B
residue 109
type
sequence W
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

22) chain B
residue 110
type
sequence T
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

23) chain B
residue 112
type
sequence E
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

24) chain B
residue 119
type
sequence L
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

25) chain B
residue 120
type
sequence I
description binding site for Di-peptide RET B 201 and LYS B 111
source : AC2

26) chain A
residue 5-22
type prosite
sequence GNWKIIRSENFEELLKVL
description FABP Cytosolic fatty-acid binding proteins signature. GNWkIirSeNFEeLLKVL
source prosite : PS00214

27) chain B
residue 132
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:16979656, ECO:0007744|PDB:2FR3
source Swiss-Prot : SWS_FT_FI1

28) chain A
residue 132
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:16979656, ECO:0007744|PDB:2FR3
source Swiss-Prot : SWS_FT_FI1

29) chain A
residue 101
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) => ECO:0000269|PubMed:21998312
source Swiss-Prot : SWS_FT_FI2

30) chain B
residue 101
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) => ECO:0000269|PubMed:21998312
source Swiss-Prot : SWS_FT_FI2


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