eF-site ID 4yj3-B
PDB Code 4yj3
Chain B

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Title Crystal structure of tubulin bound to compound 2
Classification CELL CYCLE
Compound Tubulin alpha-1B chain
Source ORGANISM_COMMON: Bovine; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence B:  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDS
DLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP
FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLQYRALTV
PELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSAT
FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEM
EFTEAESNMNDLVSEYQQYQDA
Description


Functional site

1) chain B
residue 254
type
sequence K
description binding site for residue GTP A 502
source : AC2

2) chain B
residue 10
type
sequence G
description binding site for residue GDP B 501
source : AC4

3) chain B
residue 11
type
sequence Q
description binding site for residue GDP B 501
source : AC4

4) chain B
residue 12
type
sequence C
description binding site for residue GDP B 501
source : AC4

5) chain B
residue 15
type
sequence Q
description binding site for residue GDP B 501
source : AC4

6) chain B
residue 140
type
sequence S
description binding site for residue GDP B 501
source : AC4

7) chain B
residue 143
type
sequence G
description binding site for residue GDP B 501
source : AC4

8) chain B
residue 144
type
sequence G
description binding site for residue GDP B 501
source : AC4

9) chain B
residue 145
type
sequence T
description binding site for residue GDP B 501
source : AC4

10) chain B
residue 146
type
sequence G
description binding site for residue GDP B 501
source : AC4

11) chain B
residue 177
type
sequence V
description binding site for residue GDP B 501
source : AC4

12) chain B
residue 179
type
sequence D
description binding site for residue GDP B 501
source : AC4

13) chain B
residue 183
type
sequence E
description binding site for residue GDP B 501
source : AC4

14) chain B
residue 206
type
sequence N
description binding site for residue GDP B 501
source : AC4

15) chain B
residue 224
type
sequence Y
description binding site for residue GDP B 501
source : AC4

16) chain B
residue 228
type
sequence N
description binding site for residue GDP B 501
source : AC4

17) chain B
residue 11
type
sequence Q
description binding site for residue MG B 502
source : AC5

18) chain B
residue 241
type
sequence C
description binding site for residue 4EE B 503
source : AC6

19) chain B
residue 250
type
sequence A
description binding site for residue 4EE B 503
source : AC6

20) chain B
residue 255
type
sequence L
description binding site for residue 4EE B 503
source : AC6

21) chain B
residue 258
type
sequence N
description binding site for residue 4EE B 503
source : AC6

22) chain B
residue 314
type
sequence T
description binding site for residue 4EE B 503
source : AC6

23) chain B
residue 315
type
sequence V
description binding site for residue 4EE B 503
source : AC6

24) chain B
residue 316
type
sequence A
description binding site for residue 4EE B 503
source : AC6

25) chain B
residue 317
type
sequence A
description binding site for residue 4EE B 503
source : AC6

26) chain B
residue 318
type
sequence I
description binding site for residue 4EE B 503
source : AC6

27) chain B
residue 350
type
sequence N
description binding site for residue 4EE B 503
source : AC6

28) chain B
residue 352
type
sequence K
description binding site for residue 4EE B 503
source : AC6

29) chain B
residue 354
type
sequence A
description binding site for residue 4EE B 503
source : AC6

30) chain B
residue 378
type
sequence I
description binding site for residue 4EE B 503
source : AC6

31) chain B
residue 110
type
sequence E
description binding site for residue CA B 504
source : AC7

32) chain B
residue 113
type
sequence E
description binding site for residue CA B 504
source : AC7

33) chain B
residue 158
type
sequence R
description binding site for residue MES B 505
source : AC8

34) chain B
residue 162
type
sequence P
description binding site for residue MES B 505
source : AC8

35) chain B
residue 163
type
sequence D
description binding site for residue MES B 505
source : AC8

36) chain B
residue 164
type
sequence R
description binding site for residue MES B 505
source : AC8

37) chain B
residue 165
type
sequence I
description binding site for residue MES B 505
source : AC8

38) chain B
residue 197
type
sequence N
description binding site for residue MES B 505
source : AC8

39) chain B
residue 199
type
sequence D
description binding site for residue MES B 505
source : AC8

40) chain B
residue 253
type
sequence R
description binding site for residue MES B 505
source : AC8

41) chain B
residue 142-148
type prosite
sequence GGGTGSG
description TUBULIN Tubulin subunits alpha, beta, and gamma signature. GGGTGSG
source prosite : PS00227

42) chain B
residue 1-4
type prosite
sequence MREI
description TUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MREI
source prosite : PS00228

43) chain B
residue 140
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

44) chain B
residue 144
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

45) chain B
residue 145
type MOD_RES
sequence T
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

46) chain B
residue 146
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

47) chain B
residue 206
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

48) chain B
residue 228
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

49) chain B
residue 60
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI10

50) chain B
residue 326
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI11

51) chain B
residue 71
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P68363
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI3

53) chain B
residue 57
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q3KRE8
source Swiss-Prot : SWS_FT_FI4

54) chain B
residue 60
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI5

55) chain B
residue 174
type MOD_RES
sequence S
description Phosphoserine; by CDK1 => ECO:0000250|UniProtKB:Q9BVA1
source Swiss-Prot : SWS_FT_FI6

56) chain B
residue 287
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

57) chain B
residue 292
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

58) chain B
residue 320
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI8


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