eF-site ID 4yhz-L
PDB Code 4yhz
Chain L

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Title Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide
Classification IMMUNE SYSTEM
Compound Fab Heavy Chain
Source (4YHZ)
Sequence L:  LTQPPSVSVAPGQTARITCGGTNIGDISVHWYQQRPGQAP
LVVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEA
DYYCQVWDDSINAYVFGTGTKVTVLRTVAAPSVFIFPPSD
SQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQES
VTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS
SPVTKSFNRGE
Description


Functional site

1) chain L
residue 36
type
sequence Q
description binding site for residue GOL L 301
source : AC6

2) chain L
residue 38
type
sequence R
description binding site for residue GOL L 301
source : AC6

3) chain L
residue 57
type
sequence I
description binding site for residue GOL L 301
source : AC6

4) chain L
residue 58
type
sequence P
description binding site for residue GOL L 301
source : AC6

5) chain L
residue 61
type
sequence F
description binding site for residue GOL L 301
source : AC6

6) chain L
residue 80
type
sequence G
description binding site for residue GOL L 301
source : AC6

7) chain L
residue 81
type
sequence D
description binding site for residue GOL L 301
source : AC6

8) chain L
residue 58
type
sequence P
description binding site for residue GOL L 302
source : AC7

9) chain L
residue 59
type
sequence E
description binding site for residue GOL L 302
source : AC7

10) chain L
residue 60
type
sequence R
description binding site for residue GOL L 302
source : AC7

11) chain L
residue 76
type
sequence R
description binding site for residue GOL L 302
source : AC7

12) chain L
residue 67
type
sequence G
description binding site for residue SO4 L 303
source : AC8

13) chain L
residue 68
type
sequence N
description binding site for residue SO4 L 303
source : AC8

14) chain L
residue 69
type
sequence T
description binding site for residue SO4 L 303
source : AC8

15) chain L
residue 29
type
sequence D
description binding site for Ligand residues M3L P 4 through GLN P 5 bound to THR P 3
source : AC9

16) chain L
residue 90
type
sequence W
description binding site for Ligand residues M3L P 4 through GLN P 5 bound to THR P 3
source : AC9

17) chain L
residue 97
type
sequence Y
description binding site for Ligand residues M3L P 4 through GLN P 5 bound to THR P 3
source : AC9

18) chain L
residue 14-25
type prosite
sequence PGQTARITCGGT
description AA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PgqTArITCGGT
source prosite : PS00178

19) chain L
residue 193-199
type prosite
sequence YACEVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
source prosite : PS00290


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