eF-site ID 4y9h-A PDB Code 4y9h Chain A click to enlarge Title The 1.43 angstrom crystal structure of bacteriorhodopsin crystallized from bicelles Classification LIPID BINDING PROTEIN Compound Bacteriorhodopsin Source ORGANISM_SCIENTIFIC: Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1); Sequence A:  GRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAI TTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYAD WLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVG ALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRP EVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIET LLFMVLDVSAKVGFGLILLRSRAIFG Description Functional site 1) chain A residue 86 type sequence W description binding site for residue RET A 301 source : AC1 2) chain A residue 90 type sequence T description binding site for residue RET A 301 source : AC1 3) chain A residue 118 type sequence M description binding site for residue RET A 301 source : AC1 4) chain A residue 138 type sequence W description binding site for residue RET A 301 source : AC1 5) chain A residue 141 type sequence S description binding site for residue RET A 301 source : AC1 6) chain A residue 142 type sequence T description binding site for residue RET A 301 source : AC1 7) chain A residue 182 type sequence W description binding site for residue RET A 301 source : AC1 8) chain A residue 185 type sequence Y description binding site for residue RET A 301 source : AC1 9) chain A residue 189 type sequence W description binding site for residue RET A 301 source : AC1 10) chain A residue 212 type sequence D description binding site for residue RET A 301 source : AC1 11) chain A residue 216 type sequence K description binding site for residue RET A 301 source : AC1 12) chain A residue 71 type sequence F description binding site for residue PO4 A 302 source : AC2 13) chain A residue 72 type sequence G description binding site for residue PO4 A 302 source : AC2 14) chain A residue 129 type sequence K description binding site for residue PO4 A 302 source : AC2 15) chain A residue 130 type sequence V description binding site for residue PO4 A 302 source : AC2 16) chain A residue 131 type sequence Y description binding site for residue PO4 A 302 source : AC2 17) chain A residue 150 type sequence Y description binding site for residue D12 A 305 source : AC4 18) chain A residue 176 type sequence N description binding site for residue D12 A 306 source : AC5 19) chain A residue 177 type sequence V description binding site for residue D12 A 306 source : AC5 20) chain A residue 180 type sequence V description binding site for residue D12 A 306 source : AC5 21) chain A residue 88 type sequence F description binding site for residue D10 A 307 source : AC6 22) chain A residue 136 type sequence V description binding site for residue D10 A 308 source : AC7 23) chain A residue 135 type sequence F description binding site for residue R16 A 309 source : AC8 24) chain A residue 136 type sequence V description binding site for residue R16 A 309 source : AC8 25) chain A residue 150 type sequence Y description binding site for residue R16 A 309 source : AC8 26) chain A residue 55 type sequence T description binding site for residue D12 A 311 source : AD1 27) chain A residue 56 type sequence M description binding site for residue D12 A 311 source : AD1 28) chain A residue 137 type sequence W description binding site for residue DD9 A 313 source : AD3 29) chain A residue 203 type sequence I description binding site for residue D10 A 317 source : AD6 30) chain A residue 207 type sequence L description binding site for residue D10 A 317 source : AD6 31) chain A residue 208-219 type prosite sequence FMVLDVSAKVGF description BACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. FMVLDVsAKvGF source prosite : PS00327 32) chain A residue 82-94 type prosite sequence RYADWLFTTPLLL description BACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYaDWlFTTPLLL source prosite : PS00950

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