eF-site ID 4y1h-A PDB Code 4y1h Chain A click to enlarge Title Crystal structure of K33 linked tri-Ubiquitin Classification SIGNALING PROTEIN Compound Ubiquitin-40S ribosomal protein S27a Source ORGANISM_COMMON: cattle; ORGANISM_SCIENTIFIC: Bos taurus; Sequence A:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG Description Functional site 1) chain A residue 4 type sequence F description binding site for residue EDO A 101 source : AC1 2) chain A residue 6 type sequence K description binding site for residue EDO A 101 source : AC1 3) chain A residue 12 type sequence T description binding site for residue EDO A 101 source : AC1 4) chain A residue 18 type sequence E description binding site for residue EDO A 101 source : AC1 5) chain A residue 19 type sequence P description binding site for residue EDO A 101 source : AC1 6) chain A residue 20 type sequence S description binding site for residue EDO A 101 source : AC1 7) chain A residue 31 type sequence Q description binding site for residue EDO A 101 source : AC1 8) chain A residue 66 type sequence T description binding site for residue EDO A 101 source : AC1 9) chain A residue 31 type sequence Q description binding site for residue EDO A 102 source : AC2 10) chain A residue 32 type sequence D description binding site for residue EDO A 102 source : AC2 11) chain A residue 35 type sequence G description binding site for residue EDO A 102 source : AC2 12) chain A residue 45 type sequence F description binding site for residue EDO A 102 source : AC2 13) chain A residue 46 type sequence A description binding site for residue EDO A 102 source : AC2 14) chain A residue 47 type sequence G description binding site for residue EDO A 102 source : AC2 15) chain A residue 66 type sequence T description binding site for residue EDO A 102 source : AC2 16) chain A residue 68 type sequence H description binding site for residue EDO A 102 source : AC2 17) chain A residue 7 type sequence T description binding site for residue EDO A 103 source : AC3 18) chain A residue 8 type sequence L description binding site for residue EDO A 103 source : AC3 19) chain A residue 9 type sequence T description binding site for residue EDO A 103 source : AC3 20) chain A residue 69 type sequence L description binding site for residue EDO A 103 source : AC3 21) chain A residue 71 type sequence L description binding site for residue EDO A 103 source : AC3 22) chain A residue 20 type sequence S description binding site for residue EDO A 104 source : AC4 23) chain A residue 39 type sequence D description binding site for residue EDO A 104 source : AC4 24) chain A residue 40 type sequence Q description binding site for residue EDO A 104 source : AC4 25) chain A residue 64 type sequence E description binding site for residue EDO A 104 source : AC4 26) chain A residue 74 type sequence R description binding site for residue EDO A 104 source : AC4 27) chain A residue 27-52 type prosite sequence KAKIQDKEGIPPDQQRLIFAGKQLED description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD source prosite : PS00299 28) chain A residue 54 type SITE sequence R description Interacts with activating enzyme source Swiss-Prot : SWS_FT_FI1 29) chain A residue 72 type SITE sequence R description Interacts with activating enzyme source Swiss-Prot : SWS_FT_FI1 30) chain A residue 68 type SITE sequence H description Essential for function source Swiss-Prot : SWS_FT_FI2 31) chain A residue 65 type MOD_RES sequence S description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI3 32) chain A residue 76 type MOD_RES sequence G description ADP-ribosylglycine => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI4 33) chain A residue 6 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 34) chain A residue 11 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 35) chain A residue 27 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 36) chain A residue 29 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 37) chain A residue 33 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 38) chain A residue 48 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 39) chain A residue 63 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979 source Swiss-Prot : SWS_FT_FI5 40) chain A residue 76 type CROSSLNK sequence G description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI6

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