eF-site ID 4xsz-ABCDEFGHIJKL
PDB Code 4xsz
Chain A, B, C, D, E, F, G, H, I, J, K, L
Title Crystal structure of CBR 9393 bound to Escherichia coli RNA polymerase holoenzyme
Classification transcription/antibiotic
Compound DNA-directed RNA polymerase subunit alpha
Source ORGANISM_SCIENTIFIC: Escherichia coli O139:H28 (strain E24377A / ETEC);
Sequence A:  FLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRIL
LSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKG
LAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQ
HVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERP
IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMET
NGTIDPEEAIRRAATILAEQLEAF
B:  TEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRR
ILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNL
KGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVK
PQHVICHLTDENASISMRIKVQRGRGYVPASTRIHLVDAC
YSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEA
IRRAATILAEQLEAFVDLEV
C:  YSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQD
PEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDV
QECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEV
YMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKG
KTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRR
KLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELV
PERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDV
KLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLL
AKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSA
LVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGR
MKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEV
DDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLG
DLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLS
EITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIE
TPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDE
IHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGES
SLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGG
VVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQN
TCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRV
AFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRD
TKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDI
LVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPN
GVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSE
ELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGL
TDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDL
APGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPI
EDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAK
GIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLS
TFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLG
DLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDK
MHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG
AAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPES
FNVLLKEIRSLGINIELEDE
D:  LKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYR
TFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEK
CGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLL
LDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLD
ALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNE
TNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPP
DLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAA
PDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSL
ADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCG
LPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAV
VWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAI
QLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMST
NNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVL
TGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAKT
SLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNT
CYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIP
EKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWA
AANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMAD
SGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGL
NVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDL
VVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAED
VLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVS
CDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPG
TQLTTGGLPRVADLFEARRPKEPAILAEISGIVSFGKETK
GKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVI
SDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKIND
KHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANR
ELEANGKVGATYSRDLLGITKASLATESFISAASFQETTR
VLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRM
RRRAAG
E:  ARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPE
ENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQ
AVTAIAEGR
F:  GRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQ
CSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDDPEL
AREKFAELRAQYVVTRDTIKATAQEEILKLSEVFKQFRLV
PKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNF
ITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQ
KLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEA
NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINK
LNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAK
EPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRA
ATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDV
TRERIRQIEAKALRKLRHPSRSEVLRSFLD
G:  FLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRIL
LSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKG
LAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQ
HVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERP
IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMET
NGTIDPEEAIRRAATILAEQLEAFVDLE
H:  TEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRR
ILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNL
KGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVK
PQHVICHLTDENASISMRIKVQRGRGYVPASTRLLVDACY
SPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAI
RRAATILAEQLEAFVDL
I:  YSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQD
PEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDV
QECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEV
YMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKG
KTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRR
KLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELV
PERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDV
KLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLL
AKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSA
LVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGR
MKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEV
DDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLG
DLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLS
EITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIE
TPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDE
IHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGES
SLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGG
VVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQN
TCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRV
AFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRD
TKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDI
LVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPN
GVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSE
ELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGL
TDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDL
APGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPI
EDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAK
GIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLS
TFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLG
DLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDK
MHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG
AAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPES
FNVLLKEIRSLGINIELEDE
J:  EFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDG
LFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQT
KVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDI
ERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDE
FDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRK
KLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPL
DGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQ
GRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALE
LFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEV
IREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCA
AYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPAN
GEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAER
LYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVG
RAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLK
PTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIIS
EAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSK
AMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAA
QIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCG
THEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTAD
ILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVC
AHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTSSIQ
VKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRT
KESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVIGLP
RVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITP
VDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHD
ILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQ
MLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVG
ATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAG
KRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAA
K:  ARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPE
ENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAEL
L:  TTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCS
VAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDDPELAR
EKFAELRAQYVVTRDTIKATAQEEILKLSEVFKQFRLVPK
QFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFIT
LFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKL
QQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANL
RLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRG
YKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLN
RISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEP
ISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAAT
HDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRSEVLRSFLDD
Description


Functional site

1) chain C
residue 444
type
sequence D
description binding site for residue 42U C 1401
source : AC1

2) chain C
residue 550
type
sequence V
description binding site for residue 42U C 1401
source : AC1

3) chain C
residue 551
type
sequence H
description binding site for residue 42U C 1401
source : AC1

4) chain C
residue 552
type
sequence P
description binding site for residue 42U C 1401
source : AC1

5) chain C
residue 555
type
sequence Y
description binding site for residue 42U C 1401
source : AC1

6) chain C
residue 640
type
sequence G
description binding site for residue 42U C 1401
source : AC1

7) chain C
residue 641
type
sequence E
description binding site for residue 42U C 1401
source : AC1

8) chain C
residue 642
type
sequence S
description binding site for residue 42U C 1401
source : AC1

9) chain D
residue 749
type
sequence K
description binding site for residue 42U C 1401
source : AC1

10) chain D
residue 750
type
sequence P
description binding site for residue 42U C 1401
source : AC1

11) chain D
residue 755
type
sequence I
description binding site for residue 42U C 1401
source : AC1

12) chain D
residue 773
type
sequence F
description binding site for residue 42U C 1401
source : AC1

13) chain D
residue 774
type
sequence I
description binding site for residue 42U C 1401
source : AC1

14) chain D
residue 777
type
sequence H
description binding site for residue 42U C 1401
source : AC1

15) chain D
residue 460
type
sequence D
description binding site for residue MG D 1501
source : AC2

16) chain D
residue 462
type
sequence D
description binding site for residue MG D 1501
source : AC2

17) chain D
residue 464
type
sequence D
description binding site for residue MG D 1501
source : AC2

18) chain D
residue 70
type
sequence C
description binding site for residue ZN D 1502
source : AC3

19) chain D
residue 72
type
sequence C
description binding site for residue ZN D 1502
source : AC3

20) chain D
residue 85
type
sequence C
description binding site for residue ZN D 1502
source : AC3

21) chain D
residue 88
type
sequence C
description binding site for residue ZN D 1502
source : AC3

22) chain D
residue 814
type
sequence C
description binding site for residue ZN D 1503
source : AC4

23) chain D
residue 888
type
sequence C
description binding site for residue ZN D 1503
source : AC4

24) chain D
residue 895
type
sequence C
description binding site for residue ZN D 1503
source : AC4

25) chain D
residue 898
type
sequence C
description binding site for residue ZN D 1503
source : AC4

26) chain I
residue 444
type
sequence D
description binding site for residue 42U I 1401
source : AC5

27) chain I
residue 550
type
sequence V
description binding site for residue 42U I 1401
source : AC5

28) chain I
residue 551
type
sequence H
description binding site for residue 42U I 1401
source : AC5

29) chain I
residue 552
type
sequence P
description binding site for residue 42U I 1401
source : AC5

30) chain I
residue 555
type
sequence Y
description binding site for residue 42U I 1401
source : AC5

31) chain I
residue 640
type
sequence G
description binding site for residue 42U I 1401
source : AC5

32) chain I
residue 641
type
sequence E
description binding site for residue 42U I 1401
source : AC5

33) chain I
residue 642
type
sequence S
description binding site for residue 42U I 1401
source : AC5

34) chain J
residue 749
type
sequence K
description binding site for residue 42U I 1401
source : AC5

35) chain J
residue 750
type
sequence P
description binding site for residue 42U I 1401
source : AC5

36) chain J
residue 755
type
sequence I
description binding site for residue 42U I 1401
source : AC5

37) chain J
residue 773
type
sequence F
description binding site for residue 42U I 1401
source : AC5

38) chain J
residue 774
type
sequence I
description binding site for residue 42U I 1401
source : AC5

39) chain J
residue 777
type
sequence H
description binding site for residue 42U I 1401
source : AC5

40) chain J
residue 460
type
sequence D
description binding site for residue MG J 1501
source : AC6

41) chain J
residue 462
type
sequence D
description binding site for residue MG J 1501
source : AC6

42) chain J
residue 464
type
sequence D
description binding site for residue MG J 1501
source : AC6

43) chain J
residue 70
type
sequence C
description binding site for residue ZN J 1502
source : AC7

44) chain J
residue 72
type
sequence C
description binding site for residue ZN J 1502
source : AC7

45) chain J
residue 85
type
sequence C
description binding site for residue ZN J 1502
source : AC7

46) chain J
residue 88
type
sequence C
description binding site for residue ZN J 1502
source : AC7

47) chain J
residue 814
type
sequence C
description binding site for residue ZN J 1503
source : AC8

48) chain J
residue 888
type
sequence C
description binding site for residue ZN J 1503
source : AC8

49) chain J
residue 895
type
sequence C
description binding site for residue ZN J 1503
source : AC8

50) chain J
residue 898
type
sequence C
description binding site for residue ZN J 1503
source : AC8

51) chain F
residue 573-592
type DNA_BIND
sequence LEEVGKQFDVTRERIRQIEA
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

52) chain D
residue 895
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

53) chain D
residue 898
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

54) chain J
residue 70
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

55) chain J
residue 72
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

56) chain J
residue 85
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

57) chain J
residue 88
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

58) chain J
residue 460
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

59) chain J
residue 462
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

60) chain J
residue 464
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

61) chain J
residue 814
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

62) chain L
residue 573-592
type DNA_BIND
sequence LEEVGKQFDVTRERIRQIEA
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

63) chain J
residue 888
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

64) chain J
residue 895
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

65) chain J
residue 898
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

66) chain D
residue 85
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

67) chain D
residue 88
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

68) chain D
residue 460
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

69) chain D
residue 462
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

70) chain D
residue 464
type DNA_BIND
sequence D
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

71) chain D
residue 814
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

72) chain D
residue 888
type DNA_BIND
sequence C
description H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
source Swiss-Prot : SWS_FT_FI1

73) chain F
residue 562
type SITE
sequence R
description Interaction with anti-sigma factors
source Swiss-Prot : SWS_FT_FI2

74) chain L
residue 562
type SITE
sequence R
description Interaction with anti-sigma factors
source Swiss-Prot : SWS_FT_FI2

75) chain C
residue 1063-1075
type prosite
sequence GDKMAGRHGNKGV
description RNA_POL_BETA RNA polymerases beta chain signature. GdKMAGrHGNKGV
source prosite : PS01166

76) chain F
residue 403-416
type prosite
sequence DLIQEGNIGLMKAV
description SIGMA70_1 Sigma-70 factors family signature 1. DLIQeGnIGLMkAV
source prosite : PS00715

77) chain F
residue 572-598
type prosite
sequence TLEEVGKQFDVTRERIRQIEAKALRKL
description SIGMA70_2 Sigma-70 factors family signature 2. TleEVGkqfdVTrerIrQIEakaLrkL
source prosite : PS00716


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