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|
eF-site ID
|
4xqn-BCEFHIKL |
|
PDB Code
|
4xqn |
|
Chain
|
B, C, E, F, H, I, K, L |
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click to enlarge
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Title
|
Crystal structure of AgrA LytTR domain in complex with promoters |
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Classification
|
DNA/DNA BINDING PROTEIN |
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Compound
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DNA (5'-D(*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3') |
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Source
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(AGRA_STAAC) |
|
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Sequence
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B: |
ACAGTTAAGAAT
|
| C: |
AATTCTTAACTGT
|
| E: |
ACAGTTAAGAAT
|
| F: |
AATTCTTAACTGT
|
| H: |
ACAGTTAAGAAT
|
| I: |
ATTCTTAACTGT
|
| K: |
CAGTTAAGAAT
|
| L: |
ATTCTTAACTGT
|
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Description
|
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Functional site
|
|
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1)
|
chain |
C |
| residue |
10 |
| type |
|
| sequence |
C
|
| description |
binding site for residue EDO C 101
|
| source |
: AC1
|
|
|
2)
|
chain |
I |
| residue |
11 |
| type |
|
| sequence |
T
|
| description |
binding site for residue EDO I 102
|
| source |
: AC2
|
|
|
3)
|
chain |
K |
| residue |
8 |
| type |
|
| sequence |
G
|
| description |
binding site for residue EDO L 101
|
| source |
: AC3
|
|
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4)
|
chain |
L |
| residue |
11 |
| type |
|
| sequence |
T
|
| description |
binding site for residue EDO L 101
|
| source |
: AC3
|
|
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5)
|
chain |
L |
| residue |
3 |
| type |
|
| sequence |
T
|
| description |
binding site for residue EDO D 301
|
| source |
: AC4
|
|
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6)
|
chain |
C |
| residue |
8 |
| type |
|
| sequence |
A
|
| description |
binding site for residue EDO J 301
|
| source |
: AC6
|
|
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7)
|
chain |
C |
| residue |
9 |
| type |
|
| sequence |
A
|
| description |
binding site for residue EDO J 301
|
| source |
: AC6
|
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|
|