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eF-site ID
|
4xqn-ADGJ |
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PDB Code
|
4xqn |
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Chain
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A, D, G, J |
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click to enlarge
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Title
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Crystal structure of AgrA LytTR domain in complex with promoters |
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Classification
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DNA/DNA BINDING PROTEIN |
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Compound
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DNA (5'-D(*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3') |
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Source
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(AGRA_STAAC) |
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Sequence
|
A: |
ETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIV
YFKNKEHCYASVRNVKK
|
| D: |
ETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIV
YFKNKEHCYASVRNVKKI
|
| G: |
ETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIV
YFKNKEHCYASVRNVKKI
|
| J: |
ETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIV
YFKNKEHCYASVRNVKKI
|
|
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Description
|
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Functional site
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|
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1)
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chain |
J |
| residue |
141 |
| type |
|
| sequence |
E
|
| description |
binding site for residue EDO C 101
|
| source |
: AC1
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2)
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chain |
G |
| residue |
194 |
| type |
|
| sequence |
D
|
| description |
binding site for residue EDO G 301
|
| source |
: AC5
|
|
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3)
|
chain |
J |
| residue |
191 |
| type |
|
| sequence |
Q
|
| description |
binding site for residue EDO J 301
|
| source |
: AC6
|
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