eF-site ID 4xq4-AB
PDB Code 4xq4
Chain A, B

click to enlarge
Title X-ray structure analysis of xylanase - N44D
Classification HYDROLASE
Compound Endo-1,4-beta-xylanase 2
Source (XYN2_HYPJE)
Sequence A:  IQPGTGYNNGYFYSYWNDGHGGVTYTNGPGGQFSVNWSNS
GDFVGGKGWQPGTKNKVINFSGSYNPNGNSYLSVYGWSRN
PLIEYYIVENFGTYNPSTGATKLGEVTSDGSVYDIYRTQR
VNQPSIIGTATFYQYWSVRRNHRSSGSVNTANHFNAWAQQ
GLTLGTMDYQIVAVEGYFSSGSASITVS
B:  IQPGTGYNNGYFYSYWNDGHGGVTYTNGPGGQFSVNWSNS
GDFVGGKGWQPGTKNKVINFSGSYNPNGNSYLSVYGWSRN
PLIEYYIVENFGTYNPSTGATKLGEVTSDGSVYDIYRTQR
VNQPSIIGTATFYQYWSVRRNHRSSGSVNTANHFNAWAQQ
GLTLGTMDYQIVAVEGYFSSGSASITVS
Description


Functional site

1) chain A
residue 82
type
sequence N
description binding site for residue IOD A 201
source : AC1

2) chain A
residue 146
type
sequence S
description binding site for residue IOD A 201
source : AC1

3) chain A
residue 65
type
sequence S
description binding site for residue IOD A 202
source : AC2

4) chain A
residue 184
type
sequence S
description binding site for residue IOD A 202
source : AC2

5) chain B
residue 82
type
sequence N
description binding site for residue IOD B 201
source : AC3

6) chain B
residue 146
type
sequence S
description binding site for residue IOD B 201
source : AC3

7) chain B
residue 67
type
sequence N
description binding site for residue IOD B 202
source : AC4

8) chain B
residue 184
type
sequence S
description binding site for residue IOD B 202
source : AC4

9) chain B
residue 24
type
sequence G
description binding site for residue IOD B 203
source : AC5

10) chain B
residue 26
type
sequence T
description binding site for residue IOD B 203
source : AC5

11) chain B
residue 38
type
sequence N
description binding site for residue IOD B 203
source : AC5

12) chain A
residue 39
type CARBOHYD
sequence W
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI5

13) chain A
residue 62
type CARBOHYD
sequence F
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI5

14) chain B
residue 39
type CARBOHYD
sequence W
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI5

15) chain B
residue 62
type CARBOHYD
sequence F
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI5

16) chain A
residue 87
type ACT_SITE
sequence Y
description Nucleophile => ECO:0000269|PubMed:26392527, ECO:0000305|PubMed:24419374
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 87
type ACT_SITE
sequence Y
description Nucleophile => ECO:0000269|PubMed:26392527, ECO:0000305|PubMed:24419374
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 178
type ACT_SITE
sequence G
description Proton donor => ECO:0000269|PubMed:26392527, ECO:0000305|PubMed:24419374
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 178
type ACT_SITE
sequence G
description Proton donor => ECO:0000269|PubMed:26392527, ECO:0000305|PubMed:24419374
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 74
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

21) chain B
residue 89
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

22) chain B
residue 123
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

23) chain B
residue 127
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

24) chain B
residue 137
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

25) chain B
residue 172
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 78
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 89
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 123
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 127
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

30) chain A
residue 137
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

31) chain A
residue 172
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

32) chain B
residue 74
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

33) chain B
residue 78
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:24419374
source Swiss-Prot : SWS_FT_FI3

34) chain A
residue 83-93
type prosite
sequence PLIEYYIVENF
description GH11_1 Glycosyl hydrolases family 11 (GH11) active site signature 1. PLiEYYIVEnF
source prosite : PS00776

35) chain A
residue 174-185
type prosite
sequence VAVEGYFSSGSA
description GH11_2 Glycosyl hydrolases family 11 (GH11) active site signature 2. VavEGYFSSGsA
source prosite : PS00777


Display surface

Download
Links