eF-site ID 4xkl-D
PDB Code 4xkl
Chain D

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Title Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin
Classification PROTEIN BINDING/METAL BINDING PROTEIN
Compound Ubiquitin
Source Homo sapiens (Human) (CACO2_HUMAN)
Sequence D:  QPLCFNCPICDKIFPATEKQIFEDHVFCHSL
Description


Functional site

1) chain D
residue 419
type
sequence C
description binding site for residue ACT D 501
source : AC6

2) chain D
residue 422
type
sequence C
description binding site for residue ZN D 502
source : AC7

3) chain D
residue 425
type
sequence C
description binding site for residue ZN D 502
source : AC7

4) chain D
residue 440
type
sequence H
description binding site for residue ZN D 502
source : AC7

5) chain D
residue 444
type
sequence H
description binding site for residue ZN D 502
source : AC7

6) chain D
residue 419-444
type ZN_FING
sequence CFNCPICDKIFPATEKQIFEDHVFCH
description UBZ1-type => ECO:0000255|PROSITE-ProRule:PRU01253
source Swiss-Prot : SWS_FT_FI1

7) chain D
residue 422
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01253
source Swiss-Prot : SWS_FT_FI2

8) chain D
residue 425
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01253
source Swiss-Prot : SWS_FT_FI2

9) chain D
residue 440
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01253
source Swiss-Prot : SWS_FT_FI2

10) chain D
residue 444
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01253
source Swiss-Prot : SWS_FT_FI2

11) chain D
residue 445
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3


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