eF-site ID 4xkl-C PDB Code 4xkl Chain C click to enlarge Title Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin Classification PROTEIN BINDING/METAL BINDING PROTEIN Compound Ubiquitin Source Homo sapiens (Human) (CACO2_HUMAN) Sequence C:  GSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG Description Functional site 1) chain C residue 71 type sequence L description binding site for residue GOL A 101 source : AC1 2) chain C residue 7 type sequence T description binding site for residue GOL C 101 source : AC4 3) chain C residue 8 type sequence L description binding site for residue GOL C 101 source : AC4 4) chain C residue 9 type sequence T description binding site for residue GOL C 101 source : AC4 5) chain C residue 69 type sequence L description binding site for residue GOL C 101 source : AC4 6) chain C residue 70 type sequence V description binding site for residue GOL C 101 source : AC4 7) chain C residue 71 type sequence L description binding site for residue GOL C 101 source : AC4 8) chain C residue 11 type sequence K description binding site for residue ACT C 102 source : AC5 9) chain C residue 12 type sequence T description binding site for residue ACT C 102 source : AC5 10) chain C residue 54 type ZN_FING sequence R description UBZ1-type => ECO:0000255|PROSITE-ProRule:PRU01253 source Swiss-Prot : SWS_FT_FI1 11) chain C residue 72 type ZN_FING sequence R description UBZ1-type => ECO:0000255|PROSITE-ProRule:PRU01253 source Swiss-Prot : SWS_FT_FI1 12) chain C residue 63 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106 source Swiss-Prot : SWS_FT_FI12 13) chain C residue 66 type MOD_RES sequence T description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457 source Swiss-Prot : SWS_FT_FI4 14) chain C residue 76 type MOD_RES sequence G description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI5 15) chain C residue 6 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603 source Swiss-Prot : SWS_FT_FI6 16) chain C residue 76 type CROSSLNK sequence G description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI7 17) chain C residue 11 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144 source Swiss-Prot : SWS_FT_FI8 18) chain C residue 48 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144 source Swiss-Prot : SWS_FT_FI8 19) chain C residue 33 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577 source Swiss-Prot : SWS_FT_FI11 20) chain C residue 29 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127 source Swiss-Prot : SWS_FT_FI10 21) chain C residue 27 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860 source Swiss-Prot : SWS_FT_FI9

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