eF-site ID 4x67-L
PDB Code 4x67
Chain L

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Title Crystal structure of elongating yeast RNA polymerase II stalled at oxidative Cyclopurine DNA lesions.
Classification TRANSCRIPTION/DNA
Compound DNA-directed RNA polymerase II subunit RPB1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence L:  ATLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRL
VQFEAR
Description (1)  DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerases I, II, and III subunit RPABC1, iaDNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerases I, II, and III subunit RPABC4/RNA Complex


Functional site

1) chain L
residue 31
type
sequence C
description binding site for residue ZN L 101
source : AC8

2) chain L
residue 34
type
sequence C
description binding site for residue ZN L 101
source : AC8

3) chain L
residue 48
type
sequence C
description binding site for residue ZN L 101
source : AC8

4) chain L
residue 51
type
sequence C
description binding site for residue ZN L 101
source : AC8

5) chain L
residue 31-51
type ZN_FING
sequence CAECSSKLSLSRTDAVRCKDC
description C4-type
source Swiss-Prot : SWS_FT_FI1

6) chain L
residue 31
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

7) chain L
residue 34
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

8) chain L
residue 48
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

9) chain L
residue 51
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2


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