eF-site ID 4wr3-D
PDB Code 4wr3
Chain D

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Title Y274F alanine racemase from E. coli
Classification ISOMERASE
Compound Alanine racemase, biosynthetic
Source Escherichia coli (strain K12) (ALR1_ECOLI)
Sequence D:  AATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGL
LETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFF
DARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMK
LDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFAR
ADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQ
SHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLI
AVREHKAGEPVGYGGTWVSERDTRLGVVAMGFGDGYPRAA
PSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPV
ILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
Description


Functional site

1) chain D
residue 266
type
sequence R
description binding site for residue SO4 C 1002
source : AD1

2) chain D
residue 38
type
sequence Y
description binding site for residue PLP D 1001
source : AD2

3) chain D
residue 193
type
sequence A
description binding site for residue PLP D 1001
source : AD2

4) chain D
residue 194
type
sequence S
description binding site for residue PLP D 1001
source : AD2

5) chain D
residue 209
type
sequence R
description binding site for residue PLP D 1001
source : AD2

6) chain D
residue 211
type
sequence G
description binding site for residue PLP D 1001
source : AD2

7) chain D
residue 212
type
sequence I
description binding site for residue PLP D 1001
source : AD2

8) chain D
residue 343
type
sequence Y
description binding site for residue PLP D 1001
source : AD2

9) chain D
residue 255
type
sequence Y
description binding site for residue GOL D 1002
source : AD3

10) chain D
residue 302
type
sequence A
description binding site for residue GOL D 1002
source : AD3

11) chain D
residue 303
type
sequence M
description binding site for residue GOL D 1002
source : AD3

12) chain D
residue 304
type
sequence D
description binding site for residue GOL D 1002
source : AD3

13) chain D
residue 305
type
sequence M
description binding site for residue GOL D 1002
source : AD3

14) chain D
residue 34
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI1

15) chain D
residue 255
type ACT_SITE
sequence Y
description Proton acceptor; specific for L-alanine => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI2

16) chain D
residue 129
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:18434499
source Swiss-Prot : SWS_FT_FI3

17) chain D
residue 303
type BINDING
sequence M
description BINDING => ECO:0000305|PubMed:18434499
source Swiss-Prot : SWS_FT_FI3

18) chain D
residue 34
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:18434499
source Swiss-Prot : SWS_FT_FI4

19) chain D
residue 122
type MOD_RES
sequence K
description N6-carboxylysine => ECO:0000269|PubMed:18434499
source Swiss-Prot : SWS_FT_FI5


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