|
eF-site ID
|
4wfn-A |
PDB Code
|
4wfn |
Chain
|
A |
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click to enlarge
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Title
|
Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycin |
Classification
|
RIBOSOME |
Compound
|
50S ribosomal protein L2 |
Source
|
ORGANISM_SCIENTIFIC: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422); |
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Sequence
|
A: |
RRQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSR
FIGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARI
ALLHYADGEKRYILAPEGLTVGATVNAGPEAEPKLGNALP
LRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDY
VIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRS
RWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGRVPVTPWGK
PTKGLKTRRKRKTSDRFIVT
|
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Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
233 |
type |
|
sequence |
H
|
description |
binding site for residue MG A 301
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
234 |
type |
|
sequence |
G
|
description |
binding site for residue MG A 301
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
225 |
type |
|
sequence |
A
|
description |
binding site for residue MG X 2942
|
source |
: AG6
|
|
4)
|
chain |
A |
residue |
219-230 |
type |
prosite |
sequence |
PHQRGSAMNPVD
|
description |
RIBOSOMAL_L2 Ribosomal protein L2 signature. PhqRGSAmNPvD
|
source |
prosite : PS00467
|
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