eF-site ID 4w5r-ABD
PDB Code 4w5r
Chain A, B, D

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Title The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)
Classification HYDROLASE/RNA
Compound Protein argonaute-2
Source null (4W5R)
Sequence A:  AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDI
KPEKCPRRVNREIVEHMVQHFKTQIFRKPVFDGRKNLYTA
MPLPIGRDKVELEVTLPIFKVSIKWVSCVSLQALHDALSG
RLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCS
NPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQP
VIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEI
KRKYRVCNVTRRPASHQTFPLVECTVAQYFKDRHKLVLRY
PHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVK
DEMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQF
HTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLVVVIL
PGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSN
LCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPP
AGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDL
AAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHH
ELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNE
RVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRP
SHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAP
AYYAHLVAFRARYHLVDKEGRDHQALAKAVQVHQDTLRTM
YFA
B:  UUCACAUUGUU
D:  AAUGUGAAA
Description


Functional site

1) chain A
residue 184
type
sequence A
description binding site for residue IPA A 901
source : AC1

2) chain A
residue 197
type
sequence E
description binding site for residue IPA A 901
source : AC1

3) chain A
residue 227
type
sequence A
description binding site for residue IPA A 901
source : AC1

4) chain A
residue 348
type
sequence A
description binding site for residue IPA A 901
source : AC1

5) chain A
residue 654
type
sequence Y
description binding site for residue IPA A 901
source : AC1

6) chain A
residue 658
type
sequence R
description binding site for residue IPA A 901
source : AC1

7) chain A
residue 580
type
sequence P
description binding site for residue IPA A 902
source : AC2

8) chain A
residue 581
type
sequence Q
description binding site for residue IPA A 902
source : AC2

9) chain A
residue 583
type
sequence R
description binding site for residue IPA A 902
source : AC2

10) chain A
residue 584
type
sequence P
description binding site for residue IPA A 902
source : AC2

11) chain A
residue 588
type
sequence Q
description binding site for residue IPA A 902
source : AC2

12) chain A
residue 650
type
sequence L
description binding site for residue IPH A 903
source : AC3

13) chain A
residue 654
type
sequence Y
description binding site for residue IPH A 903
source : AC3

14) chain A
residue 695
type
sequence E
description binding site for residue IPH A 903
source : AC3

15) chain A
residue 698
type
sequence Y
description binding site for residue IPH A 903
source : AC3

16) chain A
residue 587
type
sequence F
description binding site for residue IPH A 904
source : AC4

17) chain A
residue 589
type
sequence Q
description binding site for residue IPH A 904
source : AC4

18) chain A
residue 591
type
sequence V
description binding site for residue IPH A 904
source : AC4

19) chain A
residue 620
type
sequence A
description binding site for residue IPH A 904
source : AC4

20) chain A
residue 653
type
sequence F
description binding site for residue IPH A 904
source : AC4

21) chain A
residue 537
type
sequence D
description binding site for residue IPH A 905
source : AC5

22) chain A
residue 541
type
sequence G
description binding site for residue IPH A 905
source : AC5

23) chain A
residue 542
type
sequence M
description binding site for residue IPH A 905
source : AC5

24) chain A
residue 543
type
sequence A
description binding site for residue IPH A 905
source : AC5

25) chain A
residue 570
type
sequence K
description binding site for residue IPH A 905
source : AC5

26) chain A
residue 852
type
sequence T
description binding site for residue IPH A 905
source : AC5

27) chain A
residue 855
type
sequence T
description binding site for residue IPH A 905
source : AC5

28) chain A
residue 857
type
sequence Y
description binding site for residue IPH A 905
source : AC5

29) chain A
residue 597
type
sequence D
description binding site for residue MG A 906
source : AC6

30) chain A
residue 598
type
sequence V
description binding site for residue MG A 906
source : AC6

31) chain D
residue 6
type
sequence U
description binding site for residue MG D 101
source : AC7

32) chain A
residue 597
type BINDING
sequence D
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 669
type BINDING
sequence D
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 807
type BINDING
sequence H
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 700
type MOD_RES
sequence P
description 4-hydroxyproline => ECO:0000255|HAMAP-Rule:MF_03031, ECO:0000269|PubMed:18690212
source Swiss-Prot : SWS_FT_FI4

36) chain A
residue 387
type MOD_RES
sequence D
description Phosphoserine => ECO:0000269|PubMed:23603119, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3


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