eF-site ID 4uxz-D
PDB Code 4uxz
Chain D

click to enlarge
Title Structure of delta7-DgkA-syn in 7.9 MAG to 2.18 angstrom resolution
Classification TRANSFERASE
Compound DIACYLGLYCEROL KINASE-DELTA 7
Source (KDGL_ECOLI)
Sequence D:  AGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAV
TRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRA
KDLGSAAVLIAIIDAVITWAILLWSHFG
Description


Functional site

1) chain D
residue 28
type
sequence E
description BINDING SITE FOR RESIDUE ZN D 1122
source : AC1

2) chain D
residue 76
type
sequence E
description BINDING SITE FOR RESIDUE ZN D 1122
source : AC1

3) chain D
residue 32
type
sequence R
description BINDING SITE FOR RESIDUE 79M C 1122
source : AC2

4) chain D
residue 36
type
sequence V
description BINDING SITE FOR RESIDUE 79M C 1122
source : AC2

5) chain D
residue 33
type
sequence Q
description BINDING SITE FOR RESIDUE 79M B 1121
source : AC3

6) chain D
residue 40
type
sequence L
description BINDING SITE FOR RESIDUE 79N D 1123
source : AC4

7) chain D
residue 47
type
sequence W
description BINDING SITE FOR RESIDUE 79N D 1123
source : AC4

8) chain D
residue 48
type
sequence L
description BINDING SITE FOR RESIDUE 79N D 1123
source : AC4

9) chain D
residue 120
type
sequence F
description BINDING SITE FOR RESIDUE 79N D 1123
source : AC4

10) chain D
residue 22
type
sequence R
description BINDING SITE FOR RESIDUE 79M D 1124
source : AC6

11) chain D
residue 25
type
sequence W
description BINDING SITE FOR RESIDUE 79M D 1124
source : AC6

12) chain D
residue 26
type
sequence I
description BINDING SITE FOR RESIDUE 79M D 1124
source : AC6

13) chain D
residue 39
type
sequence L
description BINDING SITE FOR RESIDUE 79M D 1124
source : AC6

14) chain D
residue 34
type
sequence E
description BINDING SITE FOR RESIDUE 79M B 1123
source : AC8

15) chain D
residue 102
type
sequence L
description BINDING SITE FOR RESIDUE 79M B 1123
source : AC8

16) chain D
residue 105
type
sequence I
description BINDING SITE FOR RESIDUE 79M B 1123
source : AC8

17) chain D
residue 109
type
sequence V
description BINDING SITE FOR RESIDUE 79M B 1123
source : AC8

18) chain D
residue 113
type
sequence A
description BINDING SITE FOR RESIDUE 79M B 1123
source : AC8

19) chain D
residue 28
type
sequence E
description BINDING SITE FOR RESIDUE FLC D 1125
source : AC9

20) chain D
residue 76
type
sequence E
description BINDING SITE FOR RESIDUE FLC D 1125
source : AC9

21) chain D
residue 28
type
sequence E
description BINDING SITE FOR RESIDUE ACT D 1126
source : BC3

22) chain D
residue 69
type
sequence E
description BINDING SITE FOR RESIDUE ACT D 1126
source : BC3

23) chain D
residue 72
type
sequence N
description BINDING SITE FOR RESIDUE ACT D 1126
source : BC3

24) chain D
residue 73
type
sequence S
description BINDING SITE FOR RESIDUE ACT D 1126
source : BC3

25) chain D
residue 76
type
sequence E
description BINDING SITE FOR RESIDUE ACT D 1126
source : BC3

26) chain D
residue 95-118
type TRANSMEM
sequence DLGSAAVLIAIIDAVITWAILLWS
description Helical => ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI5

27) chain D
residue 119-121
type TOPO_DOM
sequence HFG
description Periplasmic => ECO:0000269|PubMed:15919996, ECO:0000269|PubMed:8071224
source Swiss-Prot : SWS_FT_FI6

28) chain D
residue 16
type BINDING
sequence Y
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

29) chain D
residue 28
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

30) chain D
residue 76
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

31) chain D
residue 85
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

32) chain D
residue 94
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

33) chain D
residue 22
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI11

34) chain D
residue 31-47
type TRANSMEM
sequence FRQEGVAVLLCVVIAAW
description Helical => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 51-68
type TRANSMEM
sequence DAVTRVLLISSVMLVMIV
description Helical => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI2

36) chain D
residue 48-50
type TOPO_DOM
sequence LDV
description Periplasmic => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI3

37) chain D
residue 69-94
type TOPO_DOM
sequence ELLNSAIEAVVDRIGSEYHELSGRAK
description Cytoplasmic => ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI4

38) chain D
residue 69
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI15

39) chain D
residue 98
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI16

40) chain D
residue 112
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI17

41) chain D
residue 30
type BINDING
sequence A
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI12

42) chain D
residue 47
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
source Swiss-Prot : SWS_FT_FI13

43) chain D
residue 55
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
source Swiss-Prot : SWS_FT_FI14

44) chain D
residue 69
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000305|PubMed:26673816
source Swiss-Prot : SWS_FT_FI7


Display surface

Download
Links