eF-site ID 4ut0-ABCDEFGHIJKLMNO
PDB Code 4ut0
Chain A, B, C, D, E, F, G, H, I, J, K, L, M, N, O

click to enlarge
Title THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MN (STATE 7)
Classification HYDROLASE/DNA
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (4UT0)
Sequence A:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPP
B:  GCCTTGCCGGGTAA
C:  GTTCCGGCGCG
D:  CGCGCCGGAACTTAC
E:  CCGGCAAGGC
F:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPPEAAALEHH
G:  GCCTTGCCGGGTAA
H:  GTTCCGGCGCG
I:  CGCGCCGGAACTTAC
J:  CCGGCAAGGC
K:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHL
L:  GCCTTGCCGGGTAA
M:  GTTCCGGCGCG
N:  CGCGCCGGAACTTAC
O:  CCGGCAAGGC
Description


Functional site

1) chain A
residue 183
type
sequence N
description BINDING SITE FOR RESIDUE ACT A 1190
source : AC1

2) chain A
residue 184
type
sequence P
description BINDING SITE FOR RESIDUE ACT A 1190
source : AC1

3) chain A
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE ACT A 1191
source : AC2

4) chain F
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE ACT F 1198
source : AC3

5) chain F
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE ACT F 1198
source : AC3

6) chain K
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN K 1183
source : AC4

7) chain K
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN K 1183
source : AC4

8) chain M
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN K 1183
source : AC4

9) chain N
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN K 1183
source : AC4

10) chain K
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN K 1184
source : AC5

11) chain K
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN K 1184
source : AC5

12) chain L
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN K 1184
source : AC5

13) chain O
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN K 1184
source : AC5

14) chain A
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN A 1188
source : AC6

15) chain A
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN A 1188
source : AC6

16) chain B
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN A 1188
source : AC6

17) chain E
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN A 1188
source : AC6

18) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN A 1189
source : AC7

19) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN A 1189
source : AC7

20) chain A
residue 129
type
sequence N
description BINDING SITE FOR RESIDUE MN A 1189
source : AC7

21) chain C
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN A 1189
source : AC7

22) chain D
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN A 1189
source : AC7

23) chain F
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

24) chain F
residue 42
type
sequence Q
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

25) chain F
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

26) chain F
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

27) chain G
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

28) chain J
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN F 1196
source : AC8

29) chain F
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN F 1197
source : AC9

30) chain F
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN F 1197
source : AC9

31) chain H
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN F 1197
source : AC9

32) chain I
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN F 1197
source : AC9

33) chain A
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

35) chain F
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

36) chain F
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

37) chain K
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

38) chain K
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links