eF-site ID 4u1w-D
PDB Code 4u1w
Chain D
Title Full length GluA2-kainate-(R,R)-2b complex crystal form A
Classification Transport protein, Membrane protein
Compound Glutamate receptor 2
Source (GRIA2_RAT)
Sequence D:  NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDN
LEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFC
GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQ
WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNIN
NDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVI
TIGKHVKGYHYIIANLGFTDGDLLKIQFGGAEVSGFQIVD
YDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAV
QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEI
ERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPR
KIGYWSEVDKMVVTLTEDDTSGLEQKTVVVTTILESPYVM
MKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGD
GKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREE
VIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM
AIVFAYIGVSVVLFLVSLSARIVAGVWWFFTLIIISSYTA
NLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEF
FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKG
KYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPK
GSSLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGATSA
LSLSNVAGVFYILVGGLGLAMLVALIEFAY
Description


Functional site

1) chain D
residue 600-620
type TRANSMEM
sequence IVAGVWWFFTLIIISSYTANL
description Helical
source Swiss-Prot : SWS_FT_FI1

2) chain D
residue 353
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19946266, ECO:0000269|PubMed:21317873, ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI16

3) chain D
residue 389
type CARBOHYD
sequence G
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

4) chain D
residue 396
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

5) chain D
residue 666
type MOD_RES
sequence V
description Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI12

6) chain D
residue 700
type MOD_RES
sequence Y
description Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI13

7) chain D
residue 239
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:21317873
source Swiss-Prot : SWS_FT_FI15

8) chain D
residue 454
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

9) chain D
residue 489
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

10) chain D
residue 709
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

11) chain D
residue 482
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI8

12) chain D
residue 484
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

13) chain D
residue 658
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

14) chain D
residue 659
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

15) chain D
residue 621-795
type TOPO_DOM
sequence AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR
RSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKY
AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS
SLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGATSALS
LSNVAGV
description Extracellular
source Swiss-Prot : SWS_FT_FI5

16) chain D
residue 796-816
type TRANSMEM
sequence FYILVGGLGLAMLVALIEFAY
description Helical; Name=M4
source Swiss-Prot : SWS_FT_FI6

17) chain D
residue 457
type SITE
sequence T
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

18) chain D
residue 664
type SITE
sequence I
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

19) chain D
residue 756
type SITE
sequence Q
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

20) chain D
residue 637
type SITE
sequence E
description Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI11


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