eF-site ID 4u1w-ABCD
PDB Code 4u1w
Chain A, B, C, D

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Title Full length GluA2-kainate-(R,R)-2b complex crystal form A
Classification Transport protein, Membrane protein
Compound Glutamate receptor 2
Source (GRIA2_RAT)
Sequence A:  NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDN
LEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFC
GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQ
WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNKE
RRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTD
GDLLKIQFGGAEVSGFQIVDYDDSLVSKFIERWSTLEEKE
YPGAHTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRR
GNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFDQ
NGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEDEQ
KTVVVTTILESPYVMMKKNHEMLEGNERYEGYCVDLAAEI
AKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA
DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP
GVFSFLDPLAYEIWMAIVFAYIGVSVVLFLVSSLSARIVA
GVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQ
TEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVF
VRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMK
VGGNLDSKGYGIATPKGSSLGTPVNLAVLKLSEQGVLDKL
KNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGG
LGLAMLVALIE
B:  SIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDNL
EVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCG
TLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQW
DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINN
DKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVIT
IGKHVKGYHYIIANLGFTDGDLLKIQFGGAEVSGFQIVDY
DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ
VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIE
RALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPRK
IGYWSEVDKMVVTLTEQKTVVVTTILESPYVMMKKNHEML
EGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDA
DTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPF
MSLGISIMIKKPQKSKPGVFSFLDPLIWMAIVFAYIGVSV
VLFLVSPRSLSARIVAGVWWFFTLIIISSYTANLAAFLTV
ERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAV
FDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGTPV
NLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSA
LSLSNVAGVFYILVGGLGLAMLVALIEFAYK
C:  NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDN
LEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFC
GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQ
WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNIN
NDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVI
TIGKHVKGYHYIIANLGFTDGDLLKIQFGGAEVSGFQIVD
YDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAV
QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEI
ERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPR
KIGYWSEVDKMVVTLTEDDTSGLKTVVVTTILESPYVMMK
KNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGK
YGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVI
DFSKPFMSLGISIMIKKVFSFLDPLAYEIWMAIVFAYIGV
SVVLFLVLSARIVAGVWWFFTLIIISSYTANLAAFLTVER
MVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFD
KMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTM
NEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGTPVNL
AVLKLSEQGVLDKLKNKWWYDKGECGALSLSNVAGVFYIL
VGGLGLAMLVALIEFA
D:  NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDN
LEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFC
GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQ
WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNIN
NDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVI
TIGKHVKGYHYIIANLGFTDGDLLKIQFGGAEVSGFQIVD
YDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAV
QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEI
ERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPR
KIGYWSEVDKMVVTLTEDDTSGLEQKTVVVTTILESPYVM
MKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGD
GKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREE
VIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM
AIVFAYIGVSVVLFLVSLSARIVAGVWWFFTLIIISSYTA
NLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEF
FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKG
KYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPK
GSSLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGATSA
LSLSNVAGVFYILVGGLGLAMLVALIEFAY
Description


Functional site

1) chain A
residue 600-620
type TRANSMEM
sequence IVAGVWWFFTLIIISSYTANL
description Helical
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 600-620
type TRANSMEM
sequence IVAGVWWFFTLIIISSYTANL
description Helical
source Swiss-Prot : SWS_FT_FI1

3) chain C
residue 600-620
type TRANSMEM
sequence IVAGVWWFFTLIIISSYTANL
description Helical
source Swiss-Prot : SWS_FT_FI1

4) chain D
residue 600-620
type TRANSMEM
sequence IVAGVWWFFTLIIISSYTANL
description Helical
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 353
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19946266, ECO:0000269|PubMed:21317873, ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI16

6) chain B
residue 353
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19946266, ECO:0000269|PubMed:21317873, ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI16

7) chain C
residue 353
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19946266, ECO:0000269|PubMed:21317873, ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI16

8) chain D
residue 353
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19946266, ECO:0000269|PubMed:21317873, ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI16

9) chain A
residue 396
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

10) chain B
residue 396
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

11) chain C
residue 389
type CARBOHYD
sequence G
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

12) chain C
residue 396
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

13) chain D
residue 389
type CARBOHYD
sequence G
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

14) chain D
residue 396
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI17

15) chain A
residue 666
type MOD_RES
sequence V
description Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI12

16) chain B
residue 666
type MOD_RES
sequence V
description Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI12

17) chain C
residue 666
type MOD_RES
sequence V
description Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI12

18) chain D
residue 666
type MOD_RES
sequence V
description Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI12

19) chain A
residue 700
type MOD_RES
sequence Y
description Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI13

20) chain B
residue 700
type MOD_RES
sequence Y
description Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI13

21) chain C
residue 700
type MOD_RES
sequence Y
description Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI13

22) chain D
residue 700
type MOD_RES
sequence Y
description Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
source Swiss-Prot : SWS_FT_FI13

23) chain B
residue 593
type LIPID
sequence P
description S-palmitoyl cysteine => ECO:0000250
source Swiss-Prot : SWS_FT_FI14

24) chain A
residue 239
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:21317873
source Swiss-Prot : SWS_FT_FI15

25) chain B
residue 239
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:21317873
source Swiss-Prot : SWS_FT_FI15

26) chain C
residue 239
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:21317873
source Swiss-Prot : SWS_FT_FI15

27) chain D
residue 239
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:21317873
source Swiss-Prot : SWS_FT_FI15

28) chain A
residue 454
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

29) chain D
residue 454
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

30) chain D
residue 489
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

31) chain D
residue 709
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

32) chain A
residue 489
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

33) chain A
residue 709
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

34) chain B
residue 454
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

35) chain B
residue 489
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

36) chain B
residue 709
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

37) chain C
residue 454
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

38) chain C
residue 489
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

39) chain C
residue 709
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16483599
source Swiss-Prot : SWS_FT_FI7

40) chain A
residue 482
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI8

41) chain B
residue 482
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI8

42) chain C
residue 482
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI8

43) chain D
residue 482
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI8

44) chain A
residue 484
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

45) chain D
residue 484
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

46) chain D
residue 658
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

47) chain D
residue 659
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

48) chain A
residue 658
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

49) chain A
residue 659
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

50) chain B
residue 484
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

51) chain B
residue 658
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

52) chain B
residue 659
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

53) chain C
residue 484
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

54) chain C
residue 658
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

55) chain C
residue 659
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI9

56) chain B
residue 594-599
type TOPO_DOM
sequence RSLSAR
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI2

57) chain A
residue 621-795
type TOPO_DOM
sequence AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR
RSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKY
AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS
SLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGS
KEKTSALSLSNVAGV
description Extracellular
source Swiss-Prot : SWS_FT_FI5

58) chain B
residue 621-795
type TOPO_DOM
sequence AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR
RSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKY
AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS
SLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGS
KEKTSALSLSNVAGV
description Extracellular
source Swiss-Prot : SWS_FT_FI5

59) chain C
residue 621-795
type TOPO_DOM
sequence AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR
RSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKY
AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS
SLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGALSLSN
VAGV
description Extracellular
source Swiss-Prot : SWS_FT_FI5

60) chain D
residue 621-795
type TOPO_DOM
sequence AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR
RSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKY
AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS
SLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGATSALS
LSNVAGV
description Extracellular
source Swiss-Prot : SWS_FT_FI5

61) chain B
residue 796-816
type TRANSMEM
sequence FYILVGGLGLAMLVALIEFAY
description Helical; Name=M4
source Swiss-Prot : SWS_FT_FI6

62) chain D
residue 796-816
type TRANSMEM
sequence FYILVGGLGLAMLVALIEFAY
description Helical; Name=M4
source Swiss-Prot : SWS_FT_FI6

63) chain A
residue 457
type SITE
sequence T
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

64) chain D
residue 457
type SITE
sequence T
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

65) chain D
residue 664
type SITE
sequence I
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

66) chain D
residue 756
type SITE
sequence Q
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

67) chain A
residue 664
type SITE
sequence I
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

68) chain A
residue 756
type SITE
sequence Q
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

69) chain B
residue 457
type SITE
sequence T
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

70) chain B
residue 664
type SITE
sequence I
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

71) chain B
residue 756
type SITE
sequence Q
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

72) chain C
residue 457
type SITE
sequence T
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

73) chain C
residue 664
type SITE
sequence I
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

74) chain C
residue 756
type SITE
sequence Q
description Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI10

75) chain A
residue 637
type SITE
sequence E
description Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI11

76) chain B
residue 637
type SITE
sequence E
description Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI11

77) chain C
residue 637
type SITE
sequence E
description Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI11

78) chain D
residue 637
type SITE
sequence E
description Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
source Swiss-Prot : SWS_FT_FI11


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