eF-site ID 4u1l-D PDB Code 4u1l Chain D click to enlarge Title HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes Classification IMMUNE SYSTEM Compound HLA class I histocompatibility antigen, B-81 alpha chain Source Homo sapiens (Human) (Q90VG9_9HIV1) Sequence D:  MGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLR NLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYD GKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAY LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEA TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDR TFQKWTAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP Description Functional site 1) chain D residue 72 type sequence Q description binding site for residue GOL A 301 source : AC1 2) chain D residue 75 type sequence R description binding site for residue GOL A 301 source : AC1 3) chain D residue 154 type sequence E description binding site for residue GOL A 302 source : AC2 4) chain D residue 157 type sequence R description binding site for residue GOL A 302 source : AC2 5) chain D residue 158 type sequence A description binding site for residue GOL A 302 source : AC2 6) chain D residue 161 type sequence E description binding site for residue GOL A 302 source : AC2 7) chain D residue 144 type sequence Q description binding site for residue EDO A 305 source : AC5 8) chain D residue 145 type sequence R description binding site for residue EDO A 305 source : AC5 9) chain D residue 148 type sequence E description binding site for residue EDO A 305 source : AC5 10) chain D residue 83 type sequence G description binding site for residue SO4 A 308 source : AC8 11) chain D residue 84 type sequence Y description binding site for residue SO4 A 308 source : AC8 12) chain D residue 85 type sequence Y description binding site for residue SO4 A 308 source : AC8 13) chain D residue 86 type sequence N description binding site for residue SO4 A 308 source : AC8 14) chain D residue 38 type sequence S description binding site for residue GOL D 301 source : AD2 15) chain D residue 68 type sequence K description binding site for residue GOL D 301 source : AD2 16) chain D residue 71 type sequence A description binding site for residue GOL D 301 source : AD2 17) chain D residue 72 type sequence Q description binding site for residue GOL D 301 source : AD2 18) chain D residue 75 type sequence R description binding site for residue GOL D 301 source : AD2 19) chain D residue 62 type sequence R description binding site for residue EDO D 302 source : AD3 20) chain D residue 65 type sequence Q description binding site for residue EDO D 302 source : AD3 21) chain D residue 70 type sequence Q description binding site for residue EDO D 303 source : AD4 22) chain D residue 99 type sequence Y description binding site for residue EDO D 303 source : AD4 23) chain D residue 114 type sequence N description binding site for residue EDO D 303 source : AD4 24) chain D residue 116 type sequence Y description binding site for residue EDO D 303 source : AD4 25) chain D residue 14 type sequence R description binding site for residue EDO D 304 source : AD5 26) chain D residue 20 type sequence P description binding site for residue EDO D 304 source : AD5 27) chain D residue 21 type sequence R description binding site for residue EDO D 304 source : AD5 28) chain D residue 38 type sequence S description binding site for residue EDO D 304 source : AD5 29) chain D residue 39 type sequence D description binding site for residue EDO D 304 source : AD5 30) chain D residue 75 type sequence R description binding site for residue EDO D 304 source : AD5 31) chain D residue 73 type sequence T description binding site for residue EDO D 305 source : AD6 32) chain D residue 74 type sequence D description binding site for residue EDO D 305 source : AD6 33) chain D residue 77 type sequence S description binding site for residue EDO D 305 source : AD6 34) chain D residue 95 type sequence L description binding site for residue EDO D 305 source : AD6 35) chain D residue 27 type sequence Y description binding site for residue EDO D 306 source : AD7 36) chain D residue 29 type sequence D description binding site for residue EDO D 306 source : AD7 37) chain D residue 30 type sequence D description binding site for residue EDO D 306 source : AD7 38) chain D residue 122 type sequence D description binding site for residue EDO D 307 source : AD8 39) chain D residue 125 type sequence A description binding site for residue EDO D 307 source : AD8 40) chain D residue 134 type sequence T description binding site for residue EDO D 307 source : AD8 41) chain D residue 13 type sequence S description binding site for residue EDO D 308 source : AD9 42) chain D residue 19 type sequence E description binding site for residue EDO D 308 source : AD9 43) chain D residue 150 type sequence A description binding site for residue EDO D 309 source : AE1 44) chain D residue 151 type sequence R description binding site for residue EDO D 309 source : AE1 45) chain D residue 19 type sequence E description binding site for residue EDO D 310 source : AE2 46) chain D residue 20 type sequence P description binding site for residue EDO D 310 source : AE2 47) chain D residue 79 type sequence R description binding site for residue EDO D 310 source : AE2 48) chain D residue 12 type sequence V description binding site for residue EDO E 101 source : AE3 49) chain D residue 92 type sequence S description binding site for residue EDO E 101 source : AE3 50) chain D residue 21 type sequence R description binding site for residue EDO E 102 source : AE4 51) chain D residue 55 type sequence E description binding site for residue EDO F 101 source : AE5 52) chain D residue 58 type sequence E description binding site for residue EDO F 101 source : AE5 53) chain D residue 59 type sequence Y description binding site for residue EDO F 101 source : AE5 54) chain D residue 143 type MOD_RES sequence S description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 55) chain D residue 146 type MOD_RES sequence K description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 56) chain D residue 152 type MOD_RES sequence V description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 57) chain D residue 159 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 58) chain D residue 171 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 59) chain D residue 63 type MOD_RES sequence N description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 60) chain D residue 84 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1

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