eF-site ID 4tti-D
PDB Code 4tti
Chain D

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Title Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 4 FMC molecules
Classification TRANSFERASE
Compound Purine nucleoside phosphorylase DeoD-type
Source (DEOD_ECOLI)
Sequence D:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSAHIRTHEQTTAAEAQTTFNDMIKIALESVLLGDK
Description


Functional site

1) chain D
residue 4
type
sequence H
description binding site for residue FMC A 300
source : AC1

2) chain D
residue 43
type
sequence R
description binding site for residue FMC A 300
source : AC1

3) chain D
residue 43
type
sequence R
description binding site for residue PO4 A 301
source : AC2

4) chain D
residue 20
type
sequence G
description binding site for residue PO4 D 301
source : AC8

5) chain D
residue 87
type
sequence R
description binding site for residue PO4 D 301
source : AC8

6) chain D
residue 89
type
sequence G
description binding site for residue PO4 D 301
source : AC8

7) chain D
residue 90
type
sequence S
description binding site for residue PO4 D 301
source : AC8

8) chain D
residue 64
type
sequence M
description binding site for residue FMC D 302
source : AC9

9) chain D
residue 87
type
sequence R
description binding site for residue FMC D 302
source : AC9

10) chain D
residue 90
type
sequence S
description binding site for residue FMC D 302
source : AC9

11) chain D
residue 91
type
sequence C
description binding site for residue FMC D 302
source : AC9

12) chain D
residue 92
type
sequence G
description binding site for residue FMC D 302
source : AC9

13) chain D
residue 159
type
sequence F
description binding site for residue FMC D 302
source : AC9

14) chain D
residue 178
type
sequence V
description binding site for residue FMC D 302
source : AC9

15) chain D
residue 179
type
sequence E
description binding site for residue FMC D 302
source : AC9

16) chain D
residue 180
type
sequence M
description binding site for residue FMC D 302
source : AC9

17) chain D
residue 181
type
sequence E
description binding site for residue FMC D 302
source : AC9

18) chain D
residue 97
type
sequence H
description binding site for residue SO4 D 303
source : AD1

19) chain D
residue 149
type
sequence R
description binding site for residue SO4 D 303
source : AD1

20) chain D
residue 204
type ACT_SITE
sequence A
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI1

21) chain D
residue 4
type BINDING
sequence H
description BINDING => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI2

22) chain D
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

23) chain D
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

24) chain D
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

25) chain D
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI4

26) chain D
residue 179
type BINDING
sequence E
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

27) chain D
residue 203
type BINDING
sequence S
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

28) chain D
residue 217
type SITE
sequence A
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI6

29) chain D
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI7

30) chain D
residue 20
type catalytic
sequence G
description 375
source MCSA : MCSA4

31) chain D
residue 24
type catalytic
sequence R
description 375
source MCSA : MCSA4

32) chain D
residue 43
type catalytic
sequence R
description 375
source MCSA : MCSA4

33) chain D
residue 87
type catalytic
sequence R
description 375
source MCSA : MCSA4

34) chain D
residue 90
type catalytic
sequence S
description 375
source MCSA : MCSA4

35) chain D
residue 204
type catalytic
sequence A
description 375
source MCSA : MCSA4

36) chain D
residue 217
type catalytic
sequence A
description 375
source MCSA : MCSA4


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