eF-site ID 4ts9-B
PDB Code 4ts9
Chain B

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Title Crystal structure of wild type E. Coli purine nucleoside phosphorylase with 6 FMC molecules
Classification TRANSFERASE
Compound Purine nucleoside phosphorylase DeoD-type
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence B:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVASCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDK
Description


Functional site

1) chain B
residue 20
type
sequence G
description binding site for residue PO4 B 301
source : AC3

2) chain B
residue 43
type
sequence R
description binding site for residue PO4 B 301
source : AC3

3) chain B
residue 87
type
sequence R
description binding site for residue PO4 B 301
source : AC3

4) chain B
residue 89
type
sequence A
description binding site for residue PO4 B 301
source : AC3

5) chain B
residue 90
type
sequence S
description binding site for residue PO4 B 301
source : AC3

6) chain B
residue 4
type
sequence H
description binding site for residue FMC B 302
source : AC4

7) chain B
residue 43
type
sequence R
description binding site for residue FMC B 302
source : AC4

8) chain B
residue 64
type
sequence M
description binding site for residue FMC B 302
source : AC4

9) chain B
residue 87
type
sequence R
description binding site for residue FMC B 302
source : AC4

10) chain B
residue 90
type
sequence S
description binding site for residue FMC B 302
source : AC4

11) chain B
residue 91
type
sequence C
description binding site for residue FMC B 302
source : AC4

12) chain B
residue 92
type
sequence G
description binding site for residue FMC B 302
source : AC4

13) chain B
residue 159
type
sequence F
description binding site for residue FMC B 302
source : AC4

14) chain B
residue 178
type
sequence V
description binding site for residue FMC B 302
source : AC4

15) chain B
residue 179
type
sequence E
description binding site for residue FMC B 302
source : AC4

16) chain B
residue 180
type
sequence M
description binding site for residue FMC B 302
source : AC4

17) chain B
residue 181
type
sequence E
description binding site for residue FMC B 302
source : AC4

18) chain B
residue 204
type
sequence D
description binding site for residue FMC B 302
source : AC4

19) chain B
residue 206
type
sequence I
description binding site for residue FMC B 302
source : AC4

20) chain B
residue 20
type catalytic
sequence G
description 375
source MCSA : MCSA2

21) chain B
residue 24
type catalytic
sequence R
description 375
source MCSA : MCSA2

22) chain B
residue 43
type catalytic
sequence R
description 375
source MCSA : MCSA2

23) chain B
residue 87
type catalytic
sequence R
description 375
source MCSA : MCSA2

24) chain B
residue 90
type catalytic
sequence S
description 375
source MCSA : MCSA2

25) chain B
residue 204
type catalytic
sequence D
description 375
source MCSA : MCSA2

26) chain B
residue 217
type catalytic
sequence R
description 375
source MCSA : MCSA2

27) chain B
residue 204
type ACT_SITE
sequence D
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI1

28) chain B
residue 4
type BINDING
sequence H
description BINDING => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI2

29) chain B
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

30) chain B
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

31) chain B
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

32) chain B
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI4

33) chain B
residue 203
type BINDING
sequence S
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

34) chain B
residue 179
type BINDING
sequence E
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

35) chain B
residue 217
type SITE
sequence R
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI6

36) chain B
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI7


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