eF-site ID 4ts9-A
PDB Code 4ts9
Chain A

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Title Crystal structure of wild type E. Coli purine nucleoside phosphorylase with 6 FMC molecules
Classification TRANSFERASE
Compound Purine nucleoside phosphorylase DeoD-type
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence A:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVASCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDK
Description


Functional site

1) chain A
residue 64
type
sequence M
description binding site for residue FMC A 300
source : AC1

2) chain A
residue 87
type
sequence R
description binding site for residue FMC A 300
source : AC1

3) chain A
residue 90
type
sequence S
description binding site for residue FMC A 300
source : AC1

4) chain A
residue 91
type
sequence C
description binding site for residue FMC A 300
source : AC1

5) chain A
residue 92
type
sequence G
description binding site for residue FMC A 300
source : AC1

6) chain A
residue 159
type
sequence F
description binding site for residue FMC A 300
source : AC1

7) chain A
residue 178
type
sequence V
description binding site for residue FMC A 300
source : AC1

8) chain A
residue 179
type
sequence E
description binding site for residue FMC A 300
source : AC1

9) chain A
residue 180
type
sequence M
description binding site for residue FMC A 300
source : AC1

10) chain A
residue 181
type
sequence E
description binding site for residue FMC A 300
source : AC1

11) chain A
residue 203
type
sequence S
description binding site for residue FMC A 300
source : AC1

12) chain A
residue 204
type
sequence D
description binding site for residue FMC A 300
source : AC1

13) chain A
residue 217
type
sequence R
description binding site for residue FMC A 300
source : AC1

14) chain A
residue 19
type
sequence P
description binding site for residue PO4 A 301
source : AC2

15) chain A
residue 20
type
sequence G
description binding site for residue PO4 A 301
source : AC2

16) chain A
residue 24
type
sequence R
description binding site for residue PO4 A 301
source : AC2

17) chain A
residue 87
type
sequence R
description binding site for residue PO4 A 301
source : AC2

18) chain A
residue 89
type
sequence A
description binding site for residue PO4 A 301
source : AC2

19) chain A
residue 90
type
sequence S
description binding site for residue PO4 A 301
source : AC2

20) chain A
residue 43
type
sequence R
description binding site for residue PO4 C 301
source : AC5

21) chain A
residue 4
type
sequence H
description binding site for residue FMC C 302
source : AC6

22) chain A
residue 43
type
sequence R
description binding site for residue FMC C 302
source : AC6

23) chain A
residue 20
type catalytic
sequence G
description 375
source MCSA : MCSA1

24) chain A
residue 24
type catalytic
sequence R
description 375
source MCSA : MCSA1

25) chain A
residue 43
type catalytic
sequence R
description 375
source MCSA : MCSA1

26) chain A
residue 87
type catalytic
sequence R
description 375
source MCSA : MCSA1

27) chain A
residue 90
type catalytic
sequence S
description 375
source MCSA : MCSA1

28) chain A
residue 204
type catalytic
sequence D
description 375
source MCSA : MCSA1

29) chain A
residue 217
type catalytic
sequence R
description 375
source MCSA : MCSA1

30) chain A
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

31) chain A
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

32) chain A
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI3

33) chain A
residue 179
type BINDING
sequence E
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

34) chain A
residue 203
type BINDING
sequence S
description in other chain => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI5

35) chain A
residue 217
type SITE
sequence R
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI6

36) chain A
residue 61-76
type prosite
sequence GHGMGIPSCSIYTKEL
description PNP_UDP_1 Purine and other phosphorylases family 1 signature. GhGMGiPScSIytkEL
source prosite : PS01232

37) chain A
residue 204
type ACT_SITE
sequence D
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627, ECO:0000269|PubMed:30337572
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI7

39) chain A
residue 4
type BINDING
sequence H
description BINDING => ECO:0000305|PubMed:30337572, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:11786017, ECO:0000269|PubMed:21672603, ECO:0000269|PubMed:30337572, ECO:0007744|PDB:1K9S, ECO:0007744|PDB:3ONV, ECO:0007744|PDB:3OOE, ECO:0007744|PDB:3OOH, ECO:0007744|PDB:3OPV, ECO:0007744|PDB:4TS3, ECO:0007744|PDB:4TS9, ECO:0007744|PDB:4TTA, ECO:0007744|PDB:4TTI, ECO:0007744|PDB:4TTJ
source Swiss-Prot : SWS_FT_FI4


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