eF-site ID 4tnh-c
PDB Code 4tnh
Chain c

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Title RT XFEL structure of Photosystem II in the dark state at 4.9 A resolution
Classification ELECTRON TRANSPORT,PHOTOSYNTHESIS
Compound Photosystem Q(B) protein 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus;
Sequence c:  DQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGA
MTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVV
DTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSF
FGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLY
DTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVS
VNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIW
SGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTG
PEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPT
GEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQP
WQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWL
ATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPV
LSMPSLD
Description


Functional site

1) chain c
residue 214
type
sequence L
description binding site for residue DGD a 411
source : AN5

2) chain c
residue 215
type
sequence K
description binding site for residue DGD a 411
source : AN5

3) chain c
residue 216
type
sequence S
description binding site for residue DGD a 411
source : AN5

4) chain c
residue 217
type
sequence P
description binding site for residue DGD a 411
source : AN5

5) chain c
residue 218
type
sequence F
description binding site for residue DGD a 411
source : AN5

6) chain c
residue 223
type
sequence W
description binding site for residue DGD a 411
source : AN5

7) chain c
residue 284
type
sequence F
description binding site for residue DGD a 411
source : AN5

8) chain c
residue 36
type
sequence W
description binding site for residue LHG a 412
source : AN6

9) chain c
residue 443
type
sequence W
description binding site for residue LHG a 412
source : AN6

10) chain c
residue 447
type
sequence R
description binding site for residue LHG a 412
source : AN6

11) chain c
residue 354
type
sequence E
description binding site for residue OEX a 414
source : AN8

12) chain c
residue 357
type
sequence R
description binding site for residue OEX a 414
source : AN8

13) chain c
residue 36
type
sequence W
description binding site for residue SQD a 415
source : AN9

14) chain c
residue 95
type
sequence L
description binding site for residue CLA c 501
source : AR1

15) chain c
residue 168
type
sequence L
description binding site for residue CLA c 501
source : AR1

16) chain c
residue 171
type
sequence G
description binding site for residue CLA c 501
source : AR1

17) chain c
residue 172
type
sequence A
description binding site for residue CLA c 501
source : AR1

18) chain c
residue 224
type
sequence I
description binding site for residue CLA c 501
source : AR1

19) chain c
residue 233
type
sequence V
description binding site for residue CLA c 501
source : AR1

20) chain c
residue 237
type
sequence H
description binding site for residue CLA c 501
source : AR1

21) chain c
residue 240
type
sequence I
description binding site for residue CLA c 501
source : AR1

22) chain c
residue 278
type
sequence A
description binding site for residue CLA c 501
source : AR1

23) chain c
residue 282
type
sequence M
description binding site for residue CLA c 501
source : AR1

24) chain c
residue 289
type
sequence F
description binding site for residue CLA c 501
source : AR1

25) chain c
residue 296
type
sequence V
description binding site for residue CLA c 501
source : AR1

26) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 501
source : AR1

27) chain c
residue 63
type
sequence W
description binding site for residue CLA c 502
source : AR2

28) chain c
residue 91
type
sequence H
description binding site for residue CLA c 502
source : AR2

29) chain c
residue 97
type
sequence W
description binding site for residue CLA c 502
source : AR2

30) chain c
residue 171
type
sequence G
description binding site for residue CLA c 502
source : AR2

31) chain c
residue 178
type
sequence K
description binding site for residue CLA c 502
source : AR2

32) chain c
residue 182
type
sequence F
description binding site for residue CLA c 502
source : AR2

33) chain c
residue 279
type
sequence L
description binding site for residue CLA c 502
source : AR2

34) chain c
residue 282
type
sequence M
description binding site for residue CLA c 502
source : AR2

35) chain c
residue 286
type
sequence A
description binding site for residue CLA c 502
source : AR2

36) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 502
source : AR2

37) chain c
residue 430
type
sequence H
description binding site for residue CLA c 502
source : AR2

38) chain c
residue 433
type
sequence L
description binding site for residue CLA c 502
source : AR2

39) chain c
residue 437
type
sequence F
description binding site for residue CLA c 502
source : AR2

40) chain c
residue 60
type
sequence I
description binding site for residue CLA c 503
source : AR3

41) chain c
residue 61
type
sequence V
description binding site for residue CLA c 503
source : AR3

42) chain c
residue 64
type
sequence A
description binding site for residue CLA c 503
source : AR3

43) chain c
residue 68
type
sequence T
description binding site for residue CLA c 503
source : AR3

44) chain c
residue 88
type
sequence L
description binding site for residue CLA c 503
source : AR3

45) chain c
residue 91
type
sequence H
description binding site for residue CLA c 503
source : AR3

46) chain c
residue 92
type
sequence I
description binding site for residue CLA c 503
source : AR3

47) chain c
residue 114
type
sequence V
description binding site for residue CLA c 503
source : AR3

48) chain c
residue 118
type
sequence H
description binding site for residue CLA c 503
source : AR3

49) chain c
residue 264
type
sequence F
description binding site for residue CLA c 504
source : AR4

50) chain c
residue 265
type
sequence I
description binding site for residue CLA c 504
source : AR4

51) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 504
source : AR4

52) chain c
residue 277
type
sequence G
description binding site for residue CLA c 504
source : AR4

53) chain c
residue 278
type
sequence A
description binding site for residue CLA c 504
source : AR4

54) chain c
residue 281
type
sequence M
description binding site for residue CLA c 504
source : AR4

55) chain c
residue 441
type
sequence H
description binding site for residue CLA c 504
source : AR4

56) chain c
residue 442
type
sequence L
description binding site for residue CLA c 504
source : AR4

57) chain c
residue 445
type
sequence A
description binding site for residue CLA c 504
source : AR4

58) chain c
residue 449
type
sequence R
description binding site for residue CLA c 504
source : AR4

59) chain c
residue 165
type
sequence L
description binding site for residue CLA c 505
source : AR5

60) chain c
residue 213
type
sequence L
description binding site for residue CLA c 505
source : AR5

61) chain c
residue 243
type
sequence I
description binding site for residue CLA c 505
source : AR5

62) chain c
residue 247
type
sequence G
description binding site for residue CLA c 505
source : AR5

63) chain c
residue 250
type
sequence W
description binding site for residue CLA c 505
source : AR5

64) chain c
residue 251
type
sequence H
description binding site for residue CLA c 505
source : AR5

65) chain c
residue 255
type
sequence T
description binding site for residue CLA c 505
source : AR5

66) chain c
residue 256
type
sequence P
description binding site for residue CLA c 505
source : AR5

67) chain c
residue 257
type
sequence F
description binding site for residue CLA c 505
source : AR5

68) chain c
residue 259
type
sequence W
description binding site for residue CLA c 505
source : AR5

69) chain c
residue 260
type
sequence A
description binding site for residue CLA c 505
source : AR5

70) chain c
residue 264
type
sequence F
description binding site for residue CLA c 505
source : AR5

71) chain c
residue 157
type
sequence M
description binding site for residue CLA c 506
source : AR6

72) chain c
residue 161
type
sequence L
description binding site for residue CLA c 506
source : AR6

73) chain c
residue 164
type
sequence H
description binding site for residue CLA c 506
source : AR6

74) chain c
residue 264
type
sequence F
description binding site for residue CLA c 506
source : AR6

75) chain c
residue 266
type
sequence W
description binding site for residue CLA c 506
source : AR6

76) chain c
residue 271
type
sequence Y
description binding site for residue CLA c 506
source : AR6

77) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 506
source : AR6

78) chain c
residue 275
type
sequence S
description binding site for residue CLA c 506
source : AR6

79) chain c
residue 279
type
sequence L
description binding site for residue CLA c 506
source : AR6

80) chain c
residue 36
type
sequence W
description binding site for residue CLA c 507
source : AR7

81) chain c
residue 37
type
sequence A
description binding site for residue CLA c 507
source : AR7

82) chain c
residue 39
type
sequence N
description binding site for residue CLA c 507
source : AR7

83) chain c
residue 40
type
sequence A
description binding site for residue CLA c 507
source : AR7

84) chain c
residue 269
type
sequence E
description binding site for residue CLA c 507
source : AR7

85) chain c
residue 276
type
sequence L
description binding site for residue CLA c 507
source : AR7

86) chain c
residue 436
type
sequence F
description binding site for residue CLA c 507
source : AR7

87) chain c
residue 437
type
sequence F
description binding site for residue CLA c 507
source : AR7

88) chain c
residue 440
type
sequence G
description binding site for residue CLA c 507
source : AR7

89) chain c
residue 443
type
sequence W
description binding site for residue CLA c 507
source : AR7

90) chain c
residue 444
type
sequence H
description binding site for residue CLA c 507
source : AR7

91) chain c
residue 447
type
sequence R
description binding site for residue CLA c 507
source : AR7

92) chain c
residue 39
type
sequence N
description binding site for residue CLA c 508
source : AR8

93) chain c
residue 42
type
sequence L
description binding site for residue CLA c 508
source : AR8

94) chain c
residue 49
type
sequence L
description binding site for residue CLA c 508
source : AR8

95) chain c
residue 52
type
sequence A
description binding site for residue CLA c 508
source : AR8

96) chain c
residue 53
type
sequence H
description binding site for residue CLA c 508
source : AR8

97) chain c
residue 56
type
sequence H
description binding site for residue CLA c 508
source : AR8

98) chain c
residue 149
type
sequence Y
description binding site for residue CLA c 508
source : AR8

99) chain c
residue 151
type
sequence W
description binding site for residue CLA c 508
source : AR8

100) chain c
residue 268
type
sequence G
description binding site for residue CLA c 508
source : AR8

101) chain c
residue 272
type
sequence L
description binding site for residue CLA c 508
source : AR8

102) chain c
residue 275
type
sequence S
description binding site for residue CLA c 508
source : AR8

103) chain c
residue 279
type
sequence L
description binding site for residue CLA c 508
source : AR8

104) chain c
residue 39
type
sequence N
description binding site for residue CLA c 509
source : AR9

105) chain c
residue 56
type
sequence H
description binding site for residue CLA c 509
source : AR9

106) chain c
residue 59
type
sequence L
description binding site for residue CLA c 509
source : AR9

107) chain c
residue 279
type
sequence L
description binding site for residue CLA c 509
source : AR9

108) chain c
residue 436
type
sequence F
description binding site for residue CLA c 509
source : AR9

109) chain c
residue 437
type
sequence F
description binding site for residue CLA c 509
source : AR9

110) chain c
residue 28
type
sequence Q
description binding site for residue CLA c 510
source : AS1

111) chain c
residue 35
type
sequence W
description binding site for residue CLA c 510
source : AS1

112) chain c
residue 38
type
sequence G
description binding site for residue CLA c 510
source : AS1

113) chain c
residue 39
type
sequence N
description binding site for residue CLA c 510
source : AS1

114) chain c
residue 41
type
sequence R
description binding site for residue CLA c 510
source : AS1

115) chain c
residue 42
type
sequence L
description binding site for residue CLA c 510
source : AS1

116) chain c
residue 48
type
sequence K
description binding site for residue CLA c 510
source : AS1

117) chain c
residue 52
type
sequence A
description binding site for residue CLA c 510
source : AS1

118) chain c
residue 127
type
sequence F
description binding site for residue CLA c 510
source : AS1

119) chain c
residue 134
type
sequence I
description binding site for residue CLA c 510
source : AS1

120) chain c
residue 53
type
sequence H
description binding site for residue CLA c 511
source : AS2

121) chain c
residue 57
type
sequence A
description binding site for residue CLA c 511
source : AS2

122) chain c
residue 147
type
sequence F
description binding site for residue CLA c 511
source : AS2

123) chain c
residue 163
type
sequence F
description binding site for residue CLA c 511
source : AS2

124) chain c
residue 164
type
sequence H
description binding site for residue CLA c 511
source : AS2

125) chain c
residue 167
type
sequence V
description binding site for residue CLA c 511
source : AS2

126) chain c
residue 168
type
sequence L
description binding site for residue CLA c 511
source : AS2

127) chain c
residue 170
type
sequence I
description binding site for residue CLA c 511
source : AS2

128) chain c
residue 174
type
sequence L
description binding site for residue CLA c 511
source : AS2

129) chain c
residue 54
type
sequence V
description binding site for residue CLA c 512
source : AS3

130) chain c
residue 124
type
sequence V
description binding site for residue CLA c 512
source : AS3

131) chain c
residue 128
type
sequence G
description binding site for residue CLA c 512
source : AS3

132) chain c
residue 131
type
sequence Y
description binding site for residue CLA c 512
source : AS3

133) chain c
residue 132
type
sequence H
description binding site for residue CLA c 512
source : AS3

134) chain c
residue 137
type
sequence P
description binding site for residue CLA c 512
source : AS3

135) chain c
residue 147
type
sequence F
description binding site for residue CLA c 512
source : AS3

136) chain c
residue 55
type
sequence A
description binding site for residue BCR c 513
source : AS4

137) chain c
residue 116
type
sequence V
description binding site for residue BCR c 513
source : AS4

138) chain c
residue 119
type
sequence L
description binding site for residue BCR c 513
source : AS4

139) chain c
residue 122
type
sequence S
description binding site for residue BCR c 513
source : AS4

140) chain c
residue 123
type
sequence A
description binding site for residue BCR c 513
source : AS4

141) chain c
residue 209
type
sequence I
description binding site for residue BCR c 514
source : AS5

142) chain c
residue 212
type
sequence Y
description binding site for residue BCR c 514
source : AS5

143) chain c
residue 213
type
sequence L
description binding site for residue BCR c 514
source : AS5

144) chain c
residue 227
type
sequence V
description binding site for residue BCR c 514
source : AS5

145) chain c
residue 232
type
sequence D
description binding site for residue BCR c 514
source : AS5

146) chain c
residue 233
type
sequence V
description binding site for residue BCR c 514
source : AS5

147) chain c
residue 236
type
sequence G
description binding site for residue BCR c 514
source : AS5

148) chain c
residue 240
type
sequence I
description binding site for residue BCR c 514
source : AS5

149) chain c
residue 264
type
sequence F
description binding site for residue BCR c 514
source : AS5

150) chain c
residue 217
type
sequence P
description binding site for residue DGD c 515
source : AS6

151) chain c
residue 218
type
sequence F
description binding site for residue DGD c 515
source : AS6

152) chain c
residue 219
type
sequence G
description binding site for residue DGD c 515
source : AS6

153) chain c
residue 220
type
sequence G
description binding site for residue DGD c 515
source : AS6

154) chain c
residue 222
type
sequence G
description binding site for residue DGD c 515
source : AS6

155) chain c
residue 225
type
sequence V
description binding site for residue DGD c 515
source : AS6

156) chain c
residue 226
type
sequence S
description binding site for residue DGD c 515
source : AS6

157) chain c
residue 284
type
sequence F
description binding site for residue DGD c 515
source : AS6

158) chain c
residue 288
type
sequence C
description binding site for residue DGD c 515
source : AS6

159) chain c
residue 292
type
sequence F
description binding site for residue DGD c 515
source : AS6

160) chain c
residue 294
type
sequence N
description binding site for residue DGD c 515
source : AS6

161) chain c
residue 307
type
sequence P
description binding site for residue DGD c 515
source : AS6

162) chain c
residue 361
type
sequence F
description binding site for residue DGD c 515
source : AS6

163) chain c
residue 362
type
sequence R
description binding site for residue DGD c 515
source : AS6

164) chain c
residue 82
type
sequence Y
description binding site for residue DGD c 516
source : AS7

165) chain c
residue 83
type
sequence E
description binding site for residue DGD c 516
source : AS7

166) chain c
residue 84
type
sequence Q
description binding site for residue DGD c 516
source : AS7

167) chain c
residue 85
type
sequence G
description binding site for residue DGD c 516
source : AS7

168) chain c
residue 406
type
sequence S
description binding site for residue DGD c 516
source : AS7

169) chain c
residue 418
type
sequence N
description binding site for residue DGD c 516
source : AS7

170) chain c
residue 419
type
sequence F
description binding site for residue DGD c 516
source : AS7

171) chain c
residue 420
type
sequence V
description binding site for residue DGD c 516
source : AS7

172) chain c
residue 425
type
sequence W
description binding site for residue DGD c 516
source : AS7

173) chain c
residue 429
type
sequence S
description binding site for residue DGD c 516
source : AS7

174) chain c
residue 405
type
sequence N
description binding site for residue DGD c 517
source : AS8

175) chain c
residue 406
type
sequence S
description binding site for residue DGD c 517
source : AS8

176) chain c
residue 407
type
sequence V
description binding site for residue DGD c 517
source : AS8

177) chain c
residue 415
type
sequence N
description binding site for residue DGD c 517
source : AS8

178) chain c
residue 416
type
sequence S
description binding site for residue DGD c 517
source : AS8

179) chain c
residue 418
type
sequence N
description binding site for residue DGD c 517
source : AS8

180) chain c
residue 97
type
sequence W
description binding site for residue LMG c 518
source : AS9

181) chain c
residue 109
type
sequence F
description binding site for residue LMG c 518
source : AS9

182) chain c
residue 113
type
sequence V
description binding site for residue LMG c 518
source : AS9

183) chain c
residue 117
type
sequence V
description binding site for residue LMG c 518
source : AS9

184) chain c
residue 118
type
sequence H
description binding site for residue LMG c 518
source : AS9

185) chain c
residue 35
type
sequence W
description binding site for residue LHG c 519
source : AT1

186) chain c
residue 63
type
sequence W
description binding site for residue CLA c 520
source : AT2

187) chain c
residue 67
type
sequence M
description binding site for residue CLA c 520
source : AT2

188) chain c
residue 70
type
sequence F
description binding site for residue CLA c 520
source : AT2

189) chain c
residue 84
type
sequence Q
description binding site for residue CLA c 520
source : AT2

190) chain c
residue 85
type
sequence G
description binding site for residue CLA c 520
source : AT2

191) chain c
residue 87
type
sequence I
description binding site for residue CLA c 520
source : AT2

192) chain c
residue 425
type
sequence W
description binding site for residue CLA c 520
source : AT2

193) chain c
residue 429
type
sequence S
description binding site for residue CLA c 520
source : AT2

194) chain c
residue 112
type
sequence F
description binding site for residue BCR c 521
source : AT3

195) chain c
residue 116
type
sequence V
description binding site for residue BCR c 521
source : AT3

196) chain c
residue 121
type
sequence S
description binding site for residue BCR c 521
source : AT3

197) chain c
residue 124
type
sequence V
description binding site for residue BCR c 521
source : AT3

198) chain c
residue 70
type
sequence F
description binding site for residue LMG c 522
source : AT4

199) chain c
residue 74
type
sequence H
description binding site for residue LMG c 522
source : AT4

200) chain c
residue 266-280
type TOPO_DOM
sequence WSGEAYLSYSLGALS
description Lumenal
source Swiss-Prot : SWS_FT_FI1

201) chain c
residue 462-473
type TOPO_DOM
sequence ESEPVLSMPSLD
description Lumenal
source Swiss-Prot : SWS_FT_FI1

202) chain c
residue 281-301
type TRANSMEM
sequence MMGFIATCFVWFNNTVYPSEF
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

203) chain c
residue 437-461
type TRANSMEM
sequence FLVGHLWHAGRARAAAAGFEKGIDR
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2


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