eF-site ID 4s1r-GHL
PDB Code 4s1r
Chain G, H, L

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Title Crystal structure of a VRC01-lineage antibody, 45-VRC01.H08.F-117225, in complex with clade A/E HIV-1 gp120 core
Classification VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR
Compound clade A/E 93TH057 HIV-1 gp120 core
Source (4S1R)
Sequence G:  VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQE
IHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLT
GGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGT
GPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSEN
LTNNAKTIIVHLNKSVEINCTRPSNDIRKAYCEINGTKWN
KVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHHFNCRG
EFFYCNTTQLFNNTCIGKGCNGTITLPCKIKQIINMWQGT
GQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRP
GGGNIKDNWRSELYKYKVVQIE
H:  QVRLVQSGPQIKTPGASVTISCGTSGYDFMESLINWVRQD
IGKGPEWMGWINPRGGGVNYGRRFQGKVTMTRDVSSGTAY
LTLRGLTSDDTAKYYCVRGKSCCGGRRYCNGADCFNWDFE
HWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV
VTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
L:  VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAP
RLVIYSGSTRAAGIPDRFSGSRWGPDYTLTISNLESGDFG
VYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLK
VVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDS
TYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
GEC
Description


Functional site

1) chain L
residue 194-200
type prosite
sequence YACEVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290

2) chain H
residue 194-200
type prosite
sequence YICNVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290


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