eF-site ID 4rzr-D
PDB Code 4rzr
Chain D

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Title Bypass of a bulky adduct dG1,8 by DPO4
Classification TRANSFERASE/DNA
Compound DNA polymerase IV
Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (4RZR)
Sequence D:  MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS
GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE
AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI
PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFIE
Description


Functional site

1) chain D
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

2) chain D
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

3) chain D
residue 9
type
sequence D
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

4) chain D
residue 10
type
sequence Y
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

5) chain D
residue 11
type
sequence F
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

6) chain D
residue 12
type
sequence Y
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

7) chain D
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

8) chain D
residue 45
type
sequence T
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

9) chain D
residue 48
type
sequence Y
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

10) chain D
residue 51
type
sequence R
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

11) chain D
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

12) chain D
residue 159
type
sequence K
description BINDING SITE FOR RESIDUE DCP D 401
source : AC5

13) chain D
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA D 402
source : AC6

14) chain D
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE CA D 402
source : AC6

15) chain D
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA D 402
source : AC6

16) chain D
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA D 403
source : AC7

17) chain D
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA D 403
source : AC7

18) chain D
residue 106
type
sequence E
description BINDING SITE FOR RESIDUE CA D 403
source : AC7

19) chain D
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE NA D 404
source : AC8

20) chain D
residue 186
type
sequence I
description BINDING SITE FOR RESIDUE NA D 404
source : AC8

21) chain D
residue 80
type
sequence V
description BINDING SITE FOR RESIDUE GOL D 405
source : AC9

22) chain D
residue 83
type
sequence Q
description BINDING SITE FOR RESIDUE GOL D 405
source : AC9

23) chain D
residue 84
type
sequence V
description BINDING SITE FOR RESIDUE GOL D 405
source : AC9

24) chain D
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE GOL D 405
source : AC9

25) chain D
residue 100
type
sequence E
description BINDING SITE FOR RESIDUE GOL D 406
source : BC1

26) chain D
residue 148
type
sequence K
description BINDING SITE FOR RESIDUE GOL D 406
source : BC1

27) chain D
residue 233
type
sequence Y
description BINDING SITE FOR RESIDUE GOL D 406
source : BC1

28) chain D
residue 240
type
sequence R
description BINDING SITE FOR RESIDUE GOL D 406
source : BC1

29) chain D
residue 7
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

30) chain D
residue 105
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

31) chain D
residue 106
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

32) chain D
residue 12
type SITE
sequence Y
description Substrate discrimination
source Swiss-Prot : SWS_FT_FI3


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