eF-site ID 4rwy-A
PDB Code 4rwy
Chain A

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Title Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC131 in complex with HIV-1 clade B YU2 gp120
Classification VIRAL PROTEIN/IMMUNE SYSTEM
Compound HIV-1 YU2 gp120
Source (4RWY)
Sequence A:  VWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQE
VKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLT
GGSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGT
GPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSEN
FTNNAKTIIVQLNESVVINCTRPNNDIRQAHCNLSKTQWE
NTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCG
GEFFYCNSTQLFTWNGRNITLPCRIKQIINMWQEVGKAMY
APPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDM
RDNWRSELYKYKVVKIE
Description (1)  HIV-1 YU2 gp120, Antibody 8ANC131 heavy chain, Antibody 8ANC131 light chain


Functional site

1) chain A
residue 88
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 327
type CARBOHYD
sequence R
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 348
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 362
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 375
type CARBOHYD
sequence S
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 381
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 387
type CARBOHYD
sequence S
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 425
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 449
type CARBOHYD
sequence I
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 479
type CARBOHYD
sequence W
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 487
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 203
type CARBOHYD
sequence Q
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 209
type CARBOHYD
sequence S
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 212
type CARBOHYD
sequence P
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 228
type CARBOHYD
sequence C
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 232
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 258
type CARBOHYD
sequence Q
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 267
type CARBOHYD
sequence E
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
source Swiss-Prot : SWS_FT_FI1


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