eF-site ID 4rvy-b
PDB Code 4rvy
Chain b

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Title Serial Time resolved crystallography of Photosystem II using a femtosecond X-ray laser. The S state after two flashes (S3)
Classification OXIDOREDUCTASE
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus;
Sequence b:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE
LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT
GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE
LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL
FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH
HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS
IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ
QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK
GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA
FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF
YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG
IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG
IDPELSPEQVEWGFYQKVGDVTTR
Description


Functional site

1) chain b
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE SQD b 601
source : FC6

2) chain b
residue 113
type
sequence W
description BINDING SITE FOR RESIDUE SQD b 601
source : FC6

3) chain b
residue 117
type
sequence Y
description BINDING SITE FOR RESIDUE SQD b 601
source : FC6

4) chain b
residue 185
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 602
source : FC7

5) chain b
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 602
source : FC7

6) chain b
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 602
source : FC7

7) chain b
residue 189
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

8) chain b
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

9) chain b
residue 197
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

10) chain b
residue 200
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

11) chain b
residue 201
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

12) chain b
residue 204
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

13) chain b
residue 208
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

14) chain b
residue 250
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 603
source : FC8

15) chain b
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

16) chain b
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

17) chain b
residue 146
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

18) chain b
residue 149
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

19) chain b
residue 153
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

20) chain b
residue 201
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

21) chain b
residue 202
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

22) chain b
residue 247
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

23) chain b
residue 248
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

24) chain b
residue 252
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

25) chain b
residue 262
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 604
source : FC9

26) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

27) chain b
residue 61
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

28) chain b
residue 65
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

29) chain b
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

30) chain b
residue 149
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

31) chain b
residue 245
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

32) chain b
residue 248
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

33) chain b
residue 249
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

34) chain b
residue 252
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

35) chain b
residue 451
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

36) chain b
residue 455
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

37) chain b
residue 458
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

38) chain b
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 605
source : GC1

39) chain b
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

40) chain b
residue 30
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

41) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

42) chain b
residue 34
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

43) chain b
residue 62
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

44) chain b
residue 65
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

45) chain b
residue 66
type
sequence M
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

46) chain b
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

47) chain b
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

48) chain b
residue 96
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

49) chain b
residue 100
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

50) chain b
residue 103
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

51) chain b
residue 205
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 606
source : GC2

52) chain b
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

53) chain b
residue 70
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

54) chain b
residue 91
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

55) chain b
residue 100
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

56) chain b
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

57) chain b
residue 152
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

58) chain b
residue 153
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

59) chain b
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

60) chain b
residue 162
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

61) chain b
residue 163
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

62) chain b
residue 164
type
sequence P
description BINDING SITE FOR RESIDUE CLA b 607
source : GC3

63) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

64) chain b
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

65) chain b
residue 58
type
sequence Q
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

66) chain b
residue 59
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

67) chain b
residue 61
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

68) chain b
residue 324
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

69) chain b
residue 325
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

70) chain b
residue 327
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

71) chain b
residue 328
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

72) chain b
residue 329
type
sequence P
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

73) chain b
residue 450
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

74) chain b
residue 454
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 608
source : GC4

75) chain b
residue 229
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

76) chain b
residue 236
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

77) chain b
residue 239
type
sequence S
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

78) chain b
residue 240
type
sequence S
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

79) chain b
residue 243
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

80) chain b
residue 463
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

81) chain b
residue 466
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

82) chain b
residue 467
type
sequence I
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

83) chain b
residue 473
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 609
source : GC5

84) chain b
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

85) chain b
residue 208
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

86) chain b
residue 212
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

87) chain b
residue 215
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

88) chain b
residue 216
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

89) chain b
residue 219
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

90) chain b
residue 221
type
sequence P
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

91) chain b
residue 222
type
sequence P
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

92) chain b
residue 229
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 610
source : GC6

93) chain b
residue 135
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

94) chain b
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

95) chain b
residue 142
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

96) chain b
residue 143
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

97) chain b
residue 146
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

98) chain b
residue 231
type
sequence M
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

99) chain b
residue 237
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

100) chain b
residue 240
type
sequence S
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

101) chain b
residue 241
type
sequence S
description BINDING SITE FOR RESIDUE CLA b 611
source : GC7

102) chain b
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

103) chain b
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

104) chain b
residue 7
type
sequence R
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

105) chain b
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

106) chain b
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

107) chain b
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

108) chain b
residue 242
type
sequence I
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

109) chain b
residue 461
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

110) chain b
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

111) chain b
residue 465
type
sequence G
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

112) chain b
residue 468
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

113) chain b
residue 469
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

114) chain b
residue 472
type
sequence R
description BINDING SITE FOR RESIDUE CLA b 612
source : GC8

115) chain b
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

116) chain b
residue 19
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

117) chain b
residue 23
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

118) chain b
residue 26
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

119) chain b
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

120) chain b
residue 234
type
sequence I
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

121) chain b
residue 237
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

122) chain b
residue 238
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

123) chain b
residue 241
type
sequence S
description BINDING SITE FOR RESIDUE CLA b 613
source : GC9

124) chain b
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 614
source : HC1

125) chain b
residue 26
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 614
source : HC1

126) chain b
residue 30
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 614
source : HC1

127) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 614
source : HC1

128) chain b
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA b 614
source : HC1

129) chain b
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

130) chain b
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

131) chain b
residue 11
type
sequence V
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

132) chain b
residue 22
type
sequence A
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

133) chain b
residue 25
type
sequence M
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

134) chain b
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

135) chain b
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 615
source : HC2

136) chain b
residue 20
type
sequence I
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

137) chain b
residue 23
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

138) chain b
residue 24
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

139) chain b
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

140) chain b
residue 142
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

141) chain b
residue 145
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 616
source : HC3

142) chain b
residue 24
type
sequence L
description BINDING SITE FOR RESIDUE CLA b 617
source : HC4

143) chain b
residue 113
type
sequence W
description BINDING SITE FOR RESIDUE CLA b 617
source : HC4

144) chain b
residue 114
type
sequence H
description BINDING SITE FOR RESIDUE CLA b 617
source : HC4

145) chain b
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

146) chain b
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

147) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

148) chain b
residue 36
type
sequence S
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

149) chain b
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

150) chain b
residue 105
type
sequence G
description BINDING SITE FOR RESIDUE BCR b 618
source : HC5

151) chain b
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE LMG b 619
source : HC6

152) chain b
residue 327
type
sequence T
description BINDING SITE FOR RESIDUE LMG b 619
source : HC6

153) chain b
residue 328
type
sequence G
description BINDING SITE FOR RESIDUE LMG b 619
source : HC6

154) chain b
residue 329
type
sequence P
description BINDING SITE FOR RESIDUE LMG b 619
source : HC6

155) chain b
residue 332
type
sequence K
description BINDING SITE FOR RESIDUE LMG b 619
source : HC6

156) chain b
residue 438
type
sequence N
description BINDING SITE FOR RESIDUE CA b 620
source : HC7

157) chain b
residue 18
type
sequence R
description BINDING SITE FOR RESIDUE SQD b 621
source : HC8

158) chain b
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE SQD b 621
source : HC8

159) chain b
residue 104
type
sequence S
description BINDING SITE FOR RESIDUE SQD b 621
source : HC8

160) chain b
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE SQD b 621
source : HC8

161) chain b
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE BCR b 622
source : HC9

162) chain b
residue 37
type
sequence M
description BINDING SITE FOR RESIDUE BCR b 622
source : HC9

163) chain b
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE BCR b 622
source : HC9

164) chain b
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE BCR b 622
source : HC9

165) chain b
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE LHG d 405
source : OC2

166) chain b
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE LHG d 405
source : OC2

167) chain b
residue 7
type
sequence R
description BINDING SITE FOR RESIDUE LHG d 405
source : OC2

168) chain b
residue 464
type
sequence F
description BINDING SITE FOR RESIDUE LHG d 405
source : OC2

169) chain b
residue 468
type
sequence W
description BINDING SITE FOR RESIDUE LHG d 405
source : OC2

170) chain b
residue 193
type
sequence Y
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

171) chain b
residue 250
type
sequence F
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

172) chain b
residue 258
type
sequence Y
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

173) chain b
residue 273
type
sequence Y
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

174) chain b
residue 274
type
sequence Q
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

175) chain b
residue 277
type
sequence S
description BINDING SITE FOR RESIDUE DGD h 102
source : PC9

176) chain b
residue 18
type
sequence R
description BINDING SITE FOR RESIDUE SQD L 101
source : QC7

177) chain b
residue 104
type
sequence S
description BINDING SITE FOR RESIDUE SQD L 101
source : QC7

178) chain b
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE SQD L 101
source : QC7

179) chain b
residue 4
type
sequence P
description BINDING SITE FOR RESIDUE LHG l 103
source : RC2

180) chain b
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE LHG l 103
source : RC2

181) chain b
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE LHG l 103
source : RC2

182) chain b
residue 25
type
sequence M
description BINDING SITE FOR RESIDUE BCR T 101
source : RC5

183) chain b
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE BCR T 101
source : RC5


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