eF-site ID 4rvy-D PDB Code 4rvy Chain D click to enlarge Title Serial Time resolved crystallography of Photosystem II using a femtosecond X-ray laser. The S state after two flashes (S3) Classification OXIDOREDUCTASE Compound Photosystem II protein D1 1 Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus; Sequence D:  ERGWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLT GTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLL LLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQF EIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFA PSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALL CAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTAN RFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLA LNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMA PQDQPHENFVFPEEVLPRGNAL Description Functional site 1) chain D residue 214 type sequence H description BINDING SITE FOR RESIDUE FE2 A 602 source : AC2 2) chain D residue 268 type sequence H description BINDING SITE FOR RESIDUE FE2 A 602 source : AC2 3) chain D residue 175 type sequence V description BINDING SITE FOR RESIDUE CLA A 604 source : AC4 4) chain D residue 178 type sequence I description BINDING SITE FOR RESIDUE CLA A 604 source : AC4 5) chain D residue 179 type sequence F description BINDING SITE FOR RESIDUE CLA A 604 source : AC4 6) chain D residue 182 type sequence L description BINDING SITE FOR RESIDUE CLA A 604 source : AC4 7) chain D residue 205 type sequence L description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 8) chain D residue 208 type sequence A description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 9) chain D residue 209 type sequence L description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 10) chain D residue 213 type sequence I description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 11) chain D residue 253 type sequence W description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 12) chain D residue 257 type sequence F description BINDING SITE FOR RESIDUE PHO A 605 source : AC5 13) chain D residue 41 type sequence A description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 14) chain D residue 48 type sequence W description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 15) chain D residue 114 type sequence I description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 16) chain D residue 121 type sequence G description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 17) chain D residue 122 type sequence L description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 18) chain D residue 125 type sequence F description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 19) chain D residue 129 type sequence Q description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 20) chain D residue 142 type sequence N description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 21) chain D residue 146 type sequence F description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 22) chain D residue 149 type sequence P description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 23) chain D residue 153 type sequence F description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 24) chain D residue 174 type sequence G description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 25) chain D residue 275 type sequence P description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 26) chain D residue 279 type sequence L description BINDING SITE FOR RESIDUE PHO A 606 source : AC6 27) chain D residue 232 type sequence F description BINDING SITE FOR RESIDUE SQD A 609 source : AC9 28) chain D residue 233 type sequence R description BINDING SITE FOR RESIDUE SQD A 609 source : AC9 29) chain D residue 317 type sequence K description BINDING SITE FOR RESIDUE CL A 610 source : BC1 30) chain D residue 214 type sequence H description BINDING SITE FOR RESIDUE BCT A 612 source : BC3 31) chain D residue 244 type sequence Y description BINDING SITE FOR RESIDUE BCT A 612 source : BC3 32) chain D residue 268 type sequence H description BINDING SITE FOR RESIDUE BCT A 612 source : BC3 33) chain D residue 39 type sequence P description BINDING SITE FOR RESIDUE PL9 A 613 source : BC4 34) chain D residue 120 type sequence F description BINDING SITE FOR RESIDUE CLA B 609 source : EC1 35) chain D residue 123 type sequence I description BINDING SITE FOR RESIDUE CLA B 609 source : EC1 36) chain D residue 126 type sequence M description BINDING SITE FOR RESIDUE CLA B 609 source : EC1 37) chain D residue 127 type sequence L description BINDING SITE FOR RESIDUE CLA B 609 source : EC1 38) chain D residue 150 type sequence I description BINDING SITE FOR RESIDUE CLA B 609 source : EC1 39) chain D residue 284 type sequence I description BINDING SITE FOR RESIDUE LMG B 620 source : FC3 40) chain D residue 149 type sequence P description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 41) chain D residue 152 type sequence V description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 42) chain D residue 155 type sequence S description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 43) chain D residue 156 type sequence V description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 44) chain D residue 181 type sequence F description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 45) chain D residue 182 type sequence L description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 46) chain D residue 185 type sequence F description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 47) chain D residue 186 type sequence Q description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 48) chain D residue 191 type sequence W description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 49) chain D residue 192 type sequence T description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 50) chain D residue 197 type sequence H description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 51) chain D residue 200 type sequence G description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 52) chain D residue 204 type sequence V description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 53) chain D residue 205 type sequence L description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 54) chain D residue 282 type sequence S description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 55) chain D residue 283 type sequence A description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 56) chain D residue 286 type sequence V description BINDING SITE FOR RESIDUE CLA D 401 source : MC5 57) chain D residue 198 type sequence M description BINDING SITE FOR RESIDUE CLA D 402 source : MC6 58) chain D residue 201 type sequence V description BINDING SITE FOR RESIDUE CLA D 402 source : MC6 59) chain D residue 202 type sequence A description BINDING SITE FOR RESIDUE CLA D 402 source : MC6 60) chain D residue 205 type sequence L description BINDING SITE FOR RESIDUE CLA D 402 source : MC6 61) chain D residue 206 type sequence G description BINDING SITE FOR RESIDUE CLA D 402 source : MC6 62) chain D residue 35 type sequence I description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 63) chain D residue 36 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 64) chain D residue 39 type sequence P description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 65) chain D residue 40 type sequence C description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 66) chain D residue 43 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 67) chain D residue 89 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 68) chain D residue 90 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 69) chain D residue 91 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 70) chain D residue 92 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 71) chain D residue 93 type sequence W description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 72) chain D residue 104 type sequence W description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 73) chain D residue 112 type sequence T description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 74) chain D residue 113 type sequence F description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 75) chain D residue 116 type sequence L description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 76) chain D residue 117 type sequence H description BINDING SITE FOR RESIDUE CLA D 403 source : MC7 77) chain D residue 42 type sequence Y description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 78) chain D residue 43 type sequence L description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 79) chain D residue 46 type sequence G description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 80) chain D residue 47 type sequence G description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 81) chain D residue 49 type sequence L description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 82) chain D residue 50 type sequence T description BINDING SITE FOR RESIDUE BCR D 404 source : MC8 83) chain D residue 141 type sequence Y description BINDING SITE FOR RESIDUE LHG D 405 source : MC9 84) chain D residue 144 type sequence I description BINDING SITE FOR RESIDUE LHG D 405 source : MC9 85) chain D residue 266 type sequence W description BINDING SITE FOR RESIDUE LHG D 405 source : MC9 86) chain D residue 269 type sequence F description BINDING SITE FOR RESIDUE LHG D 405 source : MC9 87) chain D residue 277 type sequence T description BINDING SITE FOR RESIDUE LHG D 405 source : MC9 88) chain D residue 67 type sequence Y description BINDING SITE FOR RESIDUE LMG D 406 source : NC1 89) chain D residue 70 type sequence G description BINDING SITE FOR RESIDUE LMG D 406 source : NC1 90) chain D residue 71 type sequence C description BINDING SITE FOR RESIDUE LMG D 406 source : NC1 91) chain D residue 72 type sequence N description BINDING SITE FOR RESIDUE LMG D 406 source : NC1 92) chain D residue 73 type sequence F description BINDING SITE FOR RESIDUE LMG D 406 source : NC1 93) chain D residue 256 type sequence I description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 94) chain D residue 257 type sequence F description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 95) chain D residue 260 type sequence A description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 96) chain D residue 261 type sequence F description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 97) chain D residue 262 type sequence S description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 98) chain D residue 263 type sequence N description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 99) chain D residue 266 type sequence W description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 100) chain D residue 270 type sequence F description BINDING SITE FOR RESIDUE LHG D 407 source : NC2 101) chain D residue 198 type sequence M description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 102) chain D residue 199 type sequence M description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 103) chain D residue 202 type sequence A description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 104) chain D residue 214 type sequence H description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 105) chain D residue 217 type sequence T description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 106) chain D residue 253 type sequence W description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 107) chain D residue 260 type sequence A description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 108) chain D residue 261 type sequence F description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 109) chain D residue 267 type sequence L description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 110) chain D residue 270 type sequence F description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 111) chain D residue 273 type sequence F description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 112) chain D residue 274 type sequence V description BINDING SITE FOR RESIDUE PL9 D 408 source : NC3 113) chain D residue 219 type sequence E description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 114) chain D residue 220 type sequence N description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 115) chain D residue 229 type sequence A description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 116) chain D residue 230 type sequence S description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 117) chain D residue 231 type sequence T description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 118) chain D residue 232 type sequence F description BINDING SITE FOR RESIDUE LHG D 409 source : NC4 119) chain D residue 99 type sequence G description BINDING SITE FOR RESIDUE DGD D 410 source : NC5 120) chain D residue 100 type sequence D description BINDING SITE FOR RESIDUE DGD D 410 source : NC5 121) chain D residue 101 type sequence F description BINDING SITE FOR RESIDUE DGD D 410 source : NC5 122) chain D residue 102 type sequence T description BINDING SITE FOR RESIDUE DGD D 410 source : NC5 123) chain D residue 24 type sequence R description BINDING SITE FOR RESIDUE SQD D 411 source : NC6 124) chain D residue 26 type sequence R description BINDING SITE FOR RESIDUE SQD D 411 source : NC6 125) chain D residue 27 type sequence F description BINDING SITE FOR RESIDUE LHG E 101 source : OC9 126) chain D residue 87 type sequence H description BINDING SITE FOR RESIDUE DGD H 102 source : PC7 127) chain D residue 123 type sequence I description BINDING SITE FOR RESIDUE DGD H 102 source : PC7 128) chain D residue 159 type sequence I description BINDING SITE FOR RESIDUE DGD H 102 source : PC7 129) chain D residue 162 type sequence L description BINDING SITE FOR RESIDUE DGD H 102 source : PC7 130) chain D residue 291 type sequence L description BINDING SITE FOR RESIDUE DGD H 102 source : PC7 131) chain D residue 266 type sequence W description BINDING SITE FOR RESIDUE LHG L 102 source : QC8 132) chain D residue 273 type sequence F description BINDING SITE FOR RESIDUE LHG L 102 source : QC8 133) chain D residue 266-288 type TOPO_DOM sequence WLHFFMLFVPVTGLWMSAIGVVG description Lumenal source Swiss-Prot : SWS_FT_FI1 134) chain D residue 268 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:16355230, ECO:0000269|PubMed:19219048, ECO:0000303|PubMed:14764885, ECO:0000303|PubMed:20558739, ECO:0000303|PubMed:21367867, ECO:0000303|PubMed:22665786, ECO:0000303|PubMed:23413188, ECO:0000303|PubMed:25006873, ECO:0000303|PubMed:25043005, ECO:0000303|DOI:10.1039/B406989G source Swiss-Prot : SWS_FT_FI10 135) chain D residue 142 type BINDING sequence N description BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:16355230, ECO:0000269|PubMed:19219048, ECO:0000303|PubMed:20558739, ECO:0000303|PubMed:21367867, ECO:0000303|PubMed:25043005 source Swiss-Prot : SWS_FT_FI6 136) chain D residue 197 type BINDING sequence H description axial binding residue => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:16355230, ECO:0000269|PubMed:19219048, ECO:0000303|PubMed:14764885, ECO:0000303|PubMed:20558739, ECO:0000303|PubMed:21367867, ECO:0000303|PubMed:22665786, ECO:0000303|PubMed:23413188, ECO:0000303|PubMed:25043005, ECO:0000303|DOI:10.1039/B406989G source Swiss-Prot : SWS_FT_FI7 137) chain D residue 214 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:16355230, ECO:0000269|PubMed:19219048, ECO:0000303|PubMed:14764885, ECO:0000303|PubMed:20558739, ECO:0000303|PubMed:21367867, ECO:0000303|PubMed:22665786, ECO:0000303|PubMed:23413188, ECO:0000303|PubMed:25043005, ECO:0000303|DOI:10.1039/B406989G source Swiss-Prot : SWS_FT_FI8 138) chain D residue 261 type BINDING sequence F description BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:16355230, ECO:0000269|PubMed:19219048, ECO:0000303|PubMed:14764885, ECO:0000303|PubMed:20558739, ECO:0000303|PubMed:21367867, ECO:0000303|PubMed:22665786, ECO:0000303|PubMed:23413188, ECO:0000303|PubMed:25006873, ECO:0000303|PubMed:25043005 source Swiss-Prot : SWS_FT_FI9 139) chain D residue 190-216 type prosite sequence NWTLNPFHMMGVAGVLGGALLCAIHGA description REACTION_CENTER Photosynthetic reaction center proteins signature. NilmhPfHqlGvagvfggalfcAmHGS source prosite : PS00244

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