eF-site ID 4rvy-B
PDB Code 4rvy
Chain B

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Title Serial Time resolved crystallography of Photosystem II using a femtosecond X-ray laser. The S state after two flashes (S3)
Classification OXIDOREDUCTASE
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus;
Sequence B:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE
LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT
GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE
LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL
FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH
HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS
IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ
QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK
GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA
FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF
YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG
IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG
IDPELSPEQVEWGFYQKVGDVTTR
Description


Functional site

1) chain B
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE SQD B 601
source : DC2

2) chain B
residue 113
type
sequence W
description BINDING SITE FOR RESIDUE SQD B 601
source : DC2

3) chain B
residue 117
type
sequence Y
description BINDING SITE FOR RESIDUE SQD B 601
source : DC2

4) chain B
residue 185
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 602
source : DC3

5) chain B
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 602
source : DC3

6) chain B
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 602
source : DC3

7) chain B
residue 189
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

8) chain B
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

9) chain B
residue 197
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

10) chain B
residue 200
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

11) chain B
residue 201
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

12) chain B
residue 204
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

13) chain B
residue 208
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

14) chain B
residue 250
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 603
source : DC4

15) chain B
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

16) chain B
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

17) chain B
residue 146
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

18) chain B
residue 149
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

19) chain B
residue 153
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

20) chain B
residue 201
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

21) chain B
residue 202
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

22) chain B
residue 247
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

23) chain B
residue 248
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

24) chain B
residue 252
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

25) chain B
residue 262
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 604
source : DC5

26) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

27) chain B
residue 61
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

28) chain B
residue 65
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

29) chain B
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

30) chain B
residue 149
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

31) chain B
residue 245
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

32) chain B
residue 248
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

33) chain B
residue 249
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

34) chain B
residue 252
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

35) chain B
residue 451
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

36) chain B
residue 455
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

37) chain B
residue 458
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

38) chain B
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 605
source : DC6

39) chain B
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

40) chain B
residue 30
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

41) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

42) chain B
residue 34
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

43) chain B
residue 62
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

44) chain B
residue 65
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

45) chain B
residue 66
type
sequence M
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

46) chain B
residue 68
type
sequence R
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

47) chain B
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

48) chain B
residue 96
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

49) chain B
residue 100
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

50) chain B
residue 103
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

51) chain B
residue 205
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 606
source : DC7

52) chain B
residue 69
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

53) chain B
residue 70
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

54) chain B
residue 91
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

55) chain B
residue 100
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

56) chain B
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

57) chain B
residue 152
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

58) chain B
residue 153
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

59) chain B
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

60) chain B
residue 162
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

61) chain B
residue 163
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

62) chain B
residue 164
type
sequence P
description BINDING SITE FOR RESIDUE CLA B 607
source : DC8

63) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

64) chain B
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

65) chain B
residue 58
type
sequence Q
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

66) chain B
residue 59
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

67) chain B
residue 61
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

68) chain B
residue 324
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

69) chain B
residue 325
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

70) chain B
residue 327
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

71) chain B
residue 328
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

72) chain B
residue 329
type
sequence P
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

73) chain B
residue 450
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

74) chain B
residue 454
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 608
source : DC9

75) chain B
residue 229
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

76) chain B
residue 236
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

77) chain B
residue 239
type
sequence S
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

78) chain B
residue 240
type
sequence S
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

79) chain B
residue 243
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

80) chain B
residue 463
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

81) chain B
residue 466
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

82) chain B
residue 467
type
sequence I
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

83) chain B
residue 473
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 609
source : EC1

84) chain B
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

85) chain B
residue 208
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

86) chain B
residue 212
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

87) chain B
residue 215
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

88) chain B
residue 216
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

89) chain B
residue 219
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

90) chain B
residue 221
type
sequence P
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

91) chain B
residue 222
type
sequence P
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

92) chain B
residue 229
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 610
source : EC2

93) chain B
residue 135
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

94) chain B
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

95) chain B
residue 142
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

96) chain B
residue 143
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

97) chain B
residue 146
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

98) chain B
residue 231
type
sequence M
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

99) chain B
residue 237
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

100) chain B
residue 240
type
sequence S
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

101) chain B
residue 241
type
sequence S
description BINDING SITE FOR RESIDUE CLA B 611
source : EC3

102) chain B
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

103) chain B
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

104) chain B
residue 7
type
sequence R
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

105) chain B
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

106) chain B
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

107) chain B
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

108) chain B
residue 242
type
sequence I
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

109) chain B
residue 461
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

110) chain B
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

111) chain B
residue 465
type
sequence G
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

112) chain B
residue 468
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

113) chain B
residue 469
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

114) chain B
residue 472
type
sequence R
description BINDING SITE FOR RESIDUE CLA B 612
source : EC4

115) chain B
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

116) chain B
residue 19
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

117) chain B
residue 23
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

118) chain B
residue 26
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

119) chain B
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

120) chain B
residue 234
type
sequence I
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

121) chain B
residue 237
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

122) chain B
residue 238
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

123) chain B
residue 241
type
sequence S
description BINDING SITE FOR RESIDUE CLA B 613
source : EC5

124) chain B
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 614
source : EC6

125) chain B
residue 26
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 614
source : EC6

126) chain B
residue 30
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 614
source : EC6

127) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 614
source : EC6

128) chain B
residue 462
type
sequence F
description BINDING SITE FOR RESIDUE CLA B 614
source : EC6

129) chain B
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

130) chain B
residue 9
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

131) chain B
residue 11
type
sequence V
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

132) chain B
residue 22
type
sequence A
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

133) chain B
residue 25
type
sequence M
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

134) chain B
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

135) chain B
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 615
source : EC7

136) chain B
residue 20
type
sequence I
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

137) chain B
residue 23
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

138) chain B
residue 24
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

139) chain B
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

140) chain B
residue 142
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

141) chain B
residue 145
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 616
source : EC8

142) chain B
residue 24
type
sequence L
description BINDING SITE FOR RESIDUE CLA B 617
source : EC9

143) chain B
residue 113
type
sequence W
description BINDING SITE FOR RESIDUE CLA B 617
source : EC9

144) chain B
residue 114
type
sequence H
description BINDING SITE FOR RESIDUE CLA B 617
source : EC9

145) chain B
residue 25
type
sequence M
description BINDING SITE FOR RESIDUE BCR B 618
source : FC1

146) chain B
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE BCR B 618
source : FC1

147) chain B
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

148) chain B
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

149) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

150) chain B
residue 36
type
sequence S
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

151) chain B
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

152) chain B
residue 105
type
sequence G
description BINDING SITE FOR RESIDUE BCR B 619
source : FC2

153) chain B
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE LMG B 620
source : FC3

154) chain B
residue 327
type
sequence T
description BINDING SITE FOR RESIDUE LMG B 620
source : FC3

155) chain B
residue 328
type
sequence G
description BINDING SITE FOR RESIDUE LMG B 620
source : FC3

156) chain B
residue 329
type
sequence P
description BINDING SITE FOR RESIDUE LMG B 620
source : FC3

157) chain B
residue 332
type
sequence K
description BINDING SITE FOR RESIDUE LMG B 620
source : FC3

158) chain B
residue 438
type
sequence N
description BINDING SITE FOR RESIDUE CA B 621
source : FC4

159) chain B
residue 33
type
sequence W
description BINDING SITE FOR RESIDUE BCR B 622
source : FC5

160) chain B
residue 37
type
sequence M
description BINDING SITE FOR RESIDUE BCR B 622
source : FC5

161) chain B
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE BCR B 622
source : FC5

162) chain B
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE LHG D 405
source : MC9

163) chain B
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE LHG D 405
source : MC9

164) chain B
residue 7
type
sequence R
description BINDING SITE FOR RESIDUE LHG D 405
source : MC9

165) chain B
residue 464
type
sequence F
description BINDING SITE FOR RESIDUE LHG D 405
source : MC9

166) chain B
residue 468
type
sequence W
description BINDING SITE FOR RESIDUE LHG D 405
source : MC9

167) chain B
residue 193
type
sequence Y
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

168) chain B
residue 250
type
sequence F
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

169) chain B
residue 258
type
sequence Y
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

170) chain B
residue 273
type
sequence Y
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

171) chain B
residue 274
type
sequence Q
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

172) chain B
residue 277
type
sequence S
description BINDING SITE FOR RESIDUE DGD H 102
source : PC7

173) chain B
residue 4
type
sequence P
description BINDING SITE FOR RESIDUE LHG L 102
source : QC8

174) chain B
residue 5
type
sequence W
description BINDING SITE FOR RESIDUE LHG L 102
source : QC8

175) chain B
residue 6
type
sequence Y
description BINDING SITE FOR RESIDUE LHG L 102
source : QC8

176) chain B
residue 18
type
sequence R
description BINDING SITE FOR RESIDUE SQD l 101
source : QC9

177) chain B
residue 104
type
sequence S
description BINDING SITE FOR RESIDUE SQD l 101
source : QC9

178) chain B
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE SQD l 101
source : QC9

179) chain B
residue 18
type
sequence R
description BINDING SITE FOR RESIDUE SQD l 102
source : RC1

180) chain B
residue 29
type
sequence L
description BINDING SITE FOR RESIDUE SQD l 102
source : RC1

181) chain B
residue 104
type
sequence S
description BINDING SITE FOR RESIDUE SQD l 102
source : RC1

182) chain B
residue 108
type
sequence F
description BINDING SITE FOR RESIDUE SQD l 102
source : RC1

183) chain B
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE SQD l 102
source : RC1


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